Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Igkv5-43A0A0B4J1J2 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Igkv5-43A0A0B4J1J2 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Igkv5-43A0A0B4J1J2 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Igkv5-43A0A0B4J1J2 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Igkv5-43A0A0B4J1J2 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Igkv5-43A0A0B4J1J2 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Igkv5-43A0A0B4J1J2 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Igkv5-43A0A0B4J1J2 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Igkv5-43A0A0B4J1J2 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Igkv5-43A0A0B4J1J2 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Igkv5-43A0A0B4J1J2 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Igkv5-43A0A0B4J1J2 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Igkv5-43A0A0B4J1J2 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.45■■□□□ 1.02
Igkv5-43A0A0B4J1J2 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Igkv5-43A0A0B4J1J2 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Igkv5-43A0A0B4J1J2 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.44■■□□□ 1.02
Igkv5-43A0A0B4J1J2 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.44■■□□□ 1.02
Igkv5-43A0A0B4J1J2 Gm7143-201ENSMUST00000222811 859 ntBASIC21.44■■□□□ 1.02
Igkv5-43A0A0B4J1J2 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Igkv5-43A0A0B4J1J2 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
Igkv5-43A0A0B4J1J2 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Igkv5-43A0A0B4J1J2 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
Igkv5-43A0A0B4J1J2 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Igkv5-43A0A0B4J1J2 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Igkv5-43A0A0B4J1J2 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Igkv5-43A0A0B4J1J2 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Igkv5-43A0A0B4J1J2 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Igkv5-43A0A0B4J1J2 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Igkv5-43A0A0B4J1J2 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Igkv5-43A0A0B4J1J2 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.42■■□□□ 1.02
Igkv5-43A0A0B4J1J2 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Igkv5-43A0A0B4J1J2 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Igkv5-43A0A0B4J1J2 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Igkv5-43A0A0B4J1J2 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Igkv5-43A0A0B4J1J2 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Igkv5-43A0A0B4J1J2 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Igkv5-43A0A0B4J1J2 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Igkv5-43A0A0B4J1J2 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Igkv5-43A0A0B4J1J2 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.41■■□□□ 1.02
Igkv5-43A0A0B4J1J2 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Igkv5-43A0A0B4J1J2 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Igkv5-43A0A0B4J1J2 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Igkv5-43A0A0B4J1J2 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Igkv5-43A0A0B4J1J2 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.41■■□□□ 1.02
Igkv5-43A0A0B4J1J2 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Igkv5-43A0A0B4J1J2 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Igkv5-43A0A0B4J1J2 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Igkv5-43A0A0B4J1J2 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Igkv5-43A0A0B4J1J2 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.39■■□□□ 1.01
Igkv5-43A0A0B4J1J2 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.39■■□□□ 1.01
Igkv5-43A0A0B4J1J2 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Igkv5-43A0A0B4J1J2 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.01
Igkv5-43A0A0B4J1J2 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Igkv5-43A0A0B4J1J2 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Igkv5-43A0A0B4J1J2 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.38■■□□□ 1.01
Igkv5-43A0A0B4J1J2 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.38■■□□□ 1.01
Igkv5-43A0A0B4J1J2 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.38■■□□□ 1.01
Igkv5-43A0A0B4J1J2 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Igkv5-43A0A0B4J1J2 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Igkv5-43A0A0B4J1J2 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Igkv5-43A0A0B4J1J2 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.38■■□□□ 1.01
Igkv5-43A0A0B4J1J2 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Igkv5-43A0A0B4J1J2 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Igkv5-43A0A0B4J1J2 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
Igkv5-43A0A0B4J1J2 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Igkv5-43A0A0B4J1J2 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Igkv5-43A0A0B4J1J2 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
Igkv5-43A0A0B4J1J2 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.37■■□□□ 1.01
Igkv5-43A0A0B4J1J2 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.37■■□□□ 1.01
Igkv5-43A0A0B4J1J2 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Igkv5-43A0A0B4J1J2 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Igkv5-43A0A0B4J1J2 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Igkv5-43A0A0B4J1J2 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.36■■□□□ 1.01
Igkv5-43A0A0B4J1J2 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Igkv5-43A0A0B4J1J2 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Igkv5-43A0A0B4J1J2 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.36■■□□□ 1.01
Igkv5-43A0A0B4J1J2 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.36■■□□□ 1.01
Igkv5-43A0A0B4J1J2 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Igkv5-43A0A0B4J1J2 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Igkv5-43A0A0B4J1J2 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.35■■□□□ 1.01
Igkv5-43A0A0B4J1J2 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Igkv5-43A0A0B4J1J2 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Igkv5-43A0A0B4J1J2 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Igkv5-43A0A0B4J1J2 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Igkv5-43A0A0B4J1J2 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Igkv5-43A0A0B4J1J2 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Igkv5-43A0A0B4J1J2 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Igkv5-43A0A0B4J1J2 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Igkv5-43A0A0B4J1J2 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Igkv5-43A0A0B4J1J2 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Igkv5-43A0A0B4J1J2 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Igkv5-43A0A0B4J1J2 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.34■■□□□ 1.01
Igkv5-43A0A0B4J1J2 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Igkv5-43A0A0B4J1J2 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
Igkv5-43A0A0B4J1J2 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Igkv5-43A0A0B4J1J2 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Igkv5-43A0A0B4J1J2 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Igkv5-43A0A0B4J1J2 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
Igkv5-43A0A0B4J1J2 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms