Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Sirpb1aA0A0A6YYP6 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Sirpb1aA0A0A6YYP6 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.64■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.63■□□□□ 0.73
Sirpb1aA0A0A6YYP6 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Gm11687-201ENSMUST00000118911 886 ntBASIC19.63■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sirpb1aA0A0A6YYP6 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sirpb1aA0A0A6YYP6 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Sirpb1aA0A0A6YYP6 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.61■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.61■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sirpb1aA0A0A6YYP6 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Sirpb1aA0A0A6YYP6 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sirpb1aA0A0A6YYP6 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.57■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sirpb1aA0A0A6YYP6 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.56■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sirpb1aA0A0A6YYP6 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.55■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms