Protein–RNA interactions for Protein: A0A0A6YY83

Pcdh7, Protocadherin 7, mousemouse

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh7A0A0A6YY83 Gm15820-201ENSMUST00000201566 728 ntBASIC21.52■■□□□ 1.04
Pcdh7A0A0A6YY83 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdh7A0A0A6YY83 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdh7A0A0A6YY83 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Pcdh7A0A0A6YY83 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdh7A0A0A6YY83 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdh7A0A0A6YY83 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Pcdh7A0A0A6YY83 Gm15546-201ENSMUST00000122095 826 ntBASIC21.51■■□□□ 1.03
Pcdh7A0A0A6YY83 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.51■■□□□ 1.03
Pcdh7A0A0A6YY83 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdh7A0A0A6YY83 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdh7A0A0A6YY83 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
Pcdh7A0A0A6YY83 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Pcdh7A0A0A6YY83 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdh7A0A0A6YY83 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdh7A0A0A6YY83 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.5■■□□□ 1.03
Pcdh7A0A0A6YY83 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.5■■□□□ 1.03
Pcdh7A0A0A6YY83 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdh7A0A0A6YY83 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
Pcdh7A0A0A6YY83 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdh7A0A0A6YY83 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdh7A0A0A6YY83 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdh7A0A0A6YY83 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdh7A0A0A6YY83 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdh7A0A0A6YY83 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdh7A0A0A6YY83 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdh7A0A0A6YY83 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdh7A0A0A6YY83 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Pcdh7A0A0A6YY83 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.49■■□□□ 1.03
Pcdh7A0A0A6YY83 Gm40881-201ENSMUST00000223397 166 ntBASIC21.49■■□□□ 1.03
Pcdh7A0A0A6YY83 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdh7A0A0A6YY83 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdh7A0A0A6YY83 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdh7A0A0A6YY83 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdh7A0A0A6YY83 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdh7A0A0A6YY83 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdh7A0A0A6YY83 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Pcdh7A0A0A6YY83 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.48■■□□□ 1.03
Pcdh7A0A0A6YY83 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdh7A0A0A6YY83 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdh7A0A0A6YY83 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdh7A0A0A6YY83 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.47■■□□□ 1.03
Pcdh7A0A0A6YY83 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdh7A0A0A6YY83 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.47■■□□□ 1.03
Pcdh7A0A0A6YY83 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.47■■□□□ 1.03
Pcdh7A0A0A6YY83 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdh7A0A0A6YY83 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdh7A0A0A6YY83 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdh7A0A0A6YY83 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdh7A0A0A6YY83 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.46■■□□□ 1.03
Pcdh7A0A0A6YY83 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.46■■□□□ 1.03
Pcdh7A0A0A6YY83 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdh7A0A0A6YY83 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdh7A0A0A6YY83 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Pcdh7A0A0A6YY83 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdh7A0A0A6YY83 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdh7A0A0A6YY83 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Pcdh7A0A0A6YY83 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.45■■□□□ 1.02
Pcdh7A0A0A6YY83 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
Pcdh7A0A0A6YY83 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdh7A0A0A6YY83 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdh7A0A0A6YY83 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdh7A0A0A6YY83 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdh7A0A0A6YY83 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdh7A0A0A6YY83 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdh7A0A0A6YY83 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdh7A0A0A6YY83 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdh7A0A0A6YY83 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.43■■□□□ 1.02
Pcdh7A0A0A6YY83 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.43■■□□□ 1.02
Pcdh7A0A0A6YY83 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdh7A0A0A6YY83 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.43■■□□□ 1.02
Pcdh7A0A0A6YY83 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.42■■□□□ 1.02
Pcdh7A0A0A6YY83 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Pcdh7A0A0A6YY83 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdh7A0A0A6YY83 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdh7A0A0A6YY83 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdh7A0A0A6YY83 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdh7A0A0A6YY83 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdh7A0A0A6YY83 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdh7A0A0A6YY83 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Pcdh7A0A0A6YY83 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Pcdh7A0A0A6YY83 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdh7A0A0A6YY83 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Pcdh7A0A0A6YY83 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.4■■□□□ 1.02
Pcdh7A0A0A6YY83 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.4■■□□□ 1.02
Pcdh7A0A0A6YY83 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdh7A0A0A6YY83 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdh7A0A0A6YY83 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdh7A0A0A6YY83 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Pcdh7A0A0A6YY83 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
Pcdh7A0A0A6YY83 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
Pcdh7A0A0A6YY83 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
Pcdh7A0A0A6YY83 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Pcdh7A0A0A6YY83 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.39■■□□□ 1.01
Pcdh7A0A0A6YY83 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdh7A0A0A6YY83 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdh7A0A0A6YY83 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdh7A0A0A6YY83 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.39■■□□□ 1.01
Pcdh7A0A0A6YY83 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdh7A0A0A6YY83 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms