Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ighv1-47A0A0A6YY41 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-47A0A0A6YY41 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-47A0A0A6YY41 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-47A0A0A6YY41 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-47A0A0A6YY41 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ighv1-47A0A0A6YY41 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-47A0A0A6YY41 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Ighv1-47A0A0A6YY41 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-47A0A0A6YY41 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ighv1-47A0A0A6YY41 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ighv1-47A0A0A6YY41 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-47A0A0A6YY41 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-47A0A0A6YY41 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-47A0A0A6YY41 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-47A0A0A6YY41 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.12■□□□□ 0.33
Ighv1-47A0A0A6YY41 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.12■□□□□ 0.33
Ighv1-47A0A0A6YY41 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-47A0A0A6YY41 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-47A0A0A6YY41 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-47A0A0A6YY41 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Ighv1-47A0A0A6YY41 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-47A0A0A6YY41 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-47A0A0A6YY41 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-47A0A0A6YY41 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.11■□□□□ 0.33
Ighv1-47A0A0A6YY41 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-47A0A0A6YY41 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-47A0A0A6YY41 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-47A0A0A6YY41 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-47A0A0A6YY41 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.11■□□□□ 0.33
Ighv1-47A0A0A6YY41 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-47A0A0A6YY41 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-47A0A0A6YY41 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-47A0A0A6YY41 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.1■□□□□ 0.33
Ighv1-47A0A0A6YY41 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-47A0A0A6YY41 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-47A0A0A6YY41 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-47A0A0A6YY41 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-47A0A0A6YY41 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ighv1-47A0A0A6YY41 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-47A0A0A6YY41 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.1■□□□□ 0.33
Ighv1-47A0A0A6YY41 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.1■□□□□ 0.33
Ighv1-47A0A0A6YY41 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-47A0A0A6YY41 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-47A0A0A6YY41 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ighv1-47A0A0A6YY41 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-47A0A0A6YY41 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-47A0A0A6YY41 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Ighv1-47A0A0A6YY41 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-47A0A0A6YY41 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-47A0A0A6YY41 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-47A0A0A6YY41 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-47A0A0A6YY41 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-47A0A0A6YY41 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-47A0A0A6YY41 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ighv1-47A0A0A6YY41 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-47A0A0A6YY41 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-47A0A0A6YY41 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ighv1-47A0A0A6YY41 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ighv1-47A0A0A6YY41 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv1-47A0A0A6YY41 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.08■□□□□ 0.32
Ighv1-47A0A0A6YY41 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv1-47A0A0A6YY41 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv1-47A0A0A6YY41 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Ighv1-47A0A0A6YY41 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv1-47A0A0A6YY41 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv1-47A0A0A6YY41 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-47A0A0A6YY41 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-47A0A0A6YY41 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ighv1-47A0A0A6YY41 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-47A0A0A6YY41 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.07■□□□□ 0.32
Ighv1-47A0A0A6YY41 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-47A0A0A6YY41 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-47A0A0A6YY41 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-47A0A0A6YY41 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-47A0A0A6YY41 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-47A0A0A6YY41 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-47A0A0A6YY41 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.07■□□□□ 0.32
Ighv1-47A0A0A6YY41 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-47A0A0A6YY41 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-47A0A0A6YY41 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-47A0A0A6YY41 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-47A0A0A6YY41 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-47A0A0A6YY41 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-47A0A0A6YY41 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.06■□□□□ 0.32
Ighv1-47A0A0A6YY41 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-47A0A0A6YY41 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-47A0A0A6YY41 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-47A0A0A6YY41 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-47A0A0A6YY41 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.05■□□□□ 0.32
Ighv1-47A0A0A6YY41 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-47A0A0A6YY41 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-47A0A0A6YY41 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Ighv1-47A0A0A6YY41 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-47A0A0A6YY41 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-47A0A0A6YY41 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.05■□□□□ 0.32
Ighv1-47A0A0A6YY41 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.05■□□□□ 0.32
Ighv1-47A0A0A6YY41 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC17.05■□□□□ 0.32
Ighv1-47A0A0A6YY41 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-47A0A0A6YY41 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms