Protein–RNA interactions for Protein: A0A0A6YXC3

Ighv1-52, Immunoglobulin heavy variable 1-52 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-52A0A0A6YXC3 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ighv1-52A0A0A6YXC3 Gm43403-201ENSMUST00000198011 1786 ntBASIC15.83■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv1-52A0A0A6YXC3 AC093043.1-201ENSMUST00000226700 898 ntBASIC15.83■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC15.82■□□□□ 0.12
Ighv1-52A0A0A6YXC3 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC15.82■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC15.81■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ighv1-52A0A0A6YXC3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC15.81■□□□□ 0.12
Ighv1-52A0A0A6YXC3 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC15.8■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Etf1-202ENSMUST00000180351 108 ntBASIC15.8■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Gm7417-201ENSMUST00000192950 473 ntBASIC15.8■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC15.8■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Ighv1-52A0A0A6YXC3 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC15.79■□□□□ 0.12
Ighv1-52A0A0A6YXC3 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Rps24-207ENSMUST00000224568 714 ntBASIC15.79■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Dmtn-209ENSMUST00000228295 2572 ntBASIC15.79■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Gm9959-201ENSMUST00000068277 390 ntBASIC15.78■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ighv1-52A0A0A6YXC3 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC15.77■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ighv1-52A0A0A6YXC3 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC15.77■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ighv1-52A0A0A6YXC3 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC15.76■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Ighv1-52A0A0A6YXC3 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC15.76■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC15.76■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC15.76■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv1-52A0A0A6YXC3 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Gm32051-202ENSMUST00000197905 2385 ntBASIC15.75■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Gm45102-201ENSMUST00000207427 857 ntBASIC15.75■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Gm44949-201ENSMUST00000206423 1450 ntBASIC15.75■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv1-52A0A0A6YXC3 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms