Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16■□□□□ 0.15
Trav9d-1A0A075B699 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Trav9d-1A0A075B699 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav9d-1A0A075B699 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav9d-1A0A075B699 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Trav9d-1A0A075B699 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav9d-1A0A075B699 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC15.99■□□□□ 0.15
Trav9d-1A0A075B699 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav9d-1A0A075B699 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav9d-1A0A075B699 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav9d-1A0A075B699 Hsf1-207ENSMUST00000228371 2102 ntBASIC15.98■□□□□ 0.15
Trav9d-1A0A075B699 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav9d-1A0A075B699 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav9d-1A0A075B699 Gm43006-201ENSMUST00000197702 1602 ntBASIC15.98■□□□□ 0.15
Trav9d-1A0A075B699 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav9d-1A0A075B699 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC15.98■□□□□ 0.15
Trav9d-1A0A075B699 Mir6538-201ENSMUST00000183713 110 ntBASIC15.98■□□□□ 0.15
Trav9d-1A0A075B699 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav9d-1A0A075B699 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav9d-1A0A075B699 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Trav9d-1A0A075B699 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav9d-1A0A075B699 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav9d-1A0A075B699 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav9d-1A0A075B699 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav9d-1A0A075B699 Gm10420-201ENSMUST00000121713 882 ntBASIC15.97■□□□□ 0.15
Trav9d-1A0A075B699 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC15.97■□□□□ 0.15
Trav9d-1A0A075B699 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC15.97■□□□□ 0.15
Trav9d-1A0A075B699 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav9d-1A0A075B699 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav9d-1A0A075B699 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav9d-1A0A075B699 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav9d-1A0A075B699 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav9d-1A0A075B699 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav9d-1A0A075B699 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav9d-1A0A075B699 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav9d-1A0A075B699 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav9d-1A0A075B699 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav9d-1A0A075B699 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav9d-1A0A075B699 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav9d-1A0A075B699 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav9d-1A0A075B699 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav9d-1A0A075B699 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC15.96■□□□□ 0.15
Trav9d-1A0A075B699 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trav9d-1A0A075B699 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav9d-1A0A075B699 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav9d-1A0A075B699 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav9d-1A0A075B699 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Trav9d-1A0A075B699 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Trav9d-1A0A075B699 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC15.95■□□□□ 0.14
Trav9d-1A0A075B699 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav9d-1A0A075B699 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Trav9d-1A0A075B699 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav9d-1A0A075B699 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav9d-1A0A075B699 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Trav9d-1A0A075B699 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav9d-1A0A075B699 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav9d-1A0A075B699 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav9d-1A0A075B699 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav9d-1A0A075B699 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav9d-1A0A075B699 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav9d-1A0A075B699 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav9d-1A0A075B699 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav9d-1A0A075B699 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav9d-1A0A075B699 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav9d-1A0A075B699 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav9d-1A0A075B699 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
Trav9d-1A0A075B699 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Trav9d-1A0A075B699 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC15.93■□□□□ 0.14
Trav9d-1A0A075B699 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC15.93■□□□□ 0.14
Trav9d-1A0A075B699 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav9d-1A0A075B699 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav9d-1A0A075B699 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav9d-1A0A075B699 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav9d-1A0A075B699 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav9d-1A0A075B699 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav9d-1A0A075B699 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trav9d-1A0A075B699 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Trav9d-1A0A075B699 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav9d-1A0A075B699 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav9d-1A0A075B699 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav9d-1A0A075B699 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav9d-1A0A075B699 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav9d-1A0A075B699 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Trav9d-1A0A075B699 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC15.91■□□□□ 0.14
Trav9d-1A0A075B699 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trav9d-1A0A075B699 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav9d-1A0A075B699 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav9d-1A0A075B699 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Trav9d-1A0A075B699 Gm44949-201ENSMUST00000206423 1450 ntBASIC15.91■□□□□ 0.14
Trav9d-1A0A075B699 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
Trav9d-1A0A075B699 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav9d-1A0A075B699 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav9d-1A0A075B699 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Trav9d-1A0A075B699 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav9d-1A0A075B699 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Trav9d-1A0A075B699 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav9d-1A0A075B699 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav9d-1A0A075B699 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav9d-1A0A075B699 Snhg20-203ENSMUST00000182811 2153 ntBASIC15.9■□□□□ 0.14
Trav9d-1A0A075B699 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms