Protein–RNA interactions for Protein: A0A075B695

Trav9d-3, T cell receptor alpha variable 9D-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-3A0A075B695 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav9d-3A0A075B695 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC14.77□□□□□ -0.05
Trav9d-3A0A075B695 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC14.77□□□□□ -0.05
Trav9d-3A0A075B695 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav9d-3A0A075B695 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav9d-3A0A075B695 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav9d-3A0A075B695 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Trav9d-3A0A075B695 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav9d-3A0A075B695 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav9d-3A0A075B695 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9d-3A0A075B695 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9d-3A0A075B695 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trav9d-3A0A075B695 Gm28536-201ENSMUST00000190971 1317 ntBASIC14.76□□□□□ -0.05
Trav9d-3A0A075B695 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9d-3A0A075B695 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9d-3A0A075B695 Nsd1-203ENSMUST00000224156 1149 ntBASIC14.76□□□□□ -0.05
Trav9d-3A0A075B695 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9d-3A0A075B695 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9d-3A0A075B695 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9d-3A0A075B695 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Trav9d-3A0A075B695 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC14.76□□□□□ -0.05
Trav9d-3A0A075B695 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9d-3A0A075B695 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9d-3A0A075B695 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav9d-3A0A075B695 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav9d-3A0A075B695 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC14.75□□□□□ -0.05
Trav9d-3A0A075B695 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav9d-3A0A075B695 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav9d-3A0A075B695 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav9d-3A0A075B695 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav9d-3A0A075B695 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav9d-3A0A075B695 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Trav9d-3A0A075B695 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav9d-3A0A075B695 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav9d-3A0A075B695 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9d-3A0A075B695 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9d-3A0A075B695 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9d-3A0A075B695 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trav9d-3A0A075B695 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9d-3A0A075B695 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9d-3A0A075B695 Gm11847-201ENSMUST00000125165 1119 ntBASIC14.74□□□□□ -0.05
Trav9d-3A0A075B695 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC14.74□□□□□ -0.05
Trav9d-3A0A075B695 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trav9d-3A0A075B695 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9d-3A0A075B695 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
Trav9d-3A0A075B695 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9d-3A0A075B695 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9d-3A0A075B695 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trav9d-3A0A075B695 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9d-3A0A075B695 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9d-3A0A075B695 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9d-3A0A075B695 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9d-3A0A075B695 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9d-3A0A075B695 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9d-3A0A075B695 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9d-3A0A075B695 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav9d-3A0A075B695 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC14.73□□□□□ -0.05
Trav9d-3A0A075B695 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9d-3A0A075B695 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9d-3A0A075B695 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9d-3A0A075B695 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9d-3A0A075B695 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9d-3A0A075B695 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trav9d-3A0A075B695 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9d-3A0A075B695 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9d-3A0A075B695 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9d-3A0A075B695 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC14.72□□□□□ -0.05
Trav9d-3A0A075B695 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Trav9d-3A0A075B695 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9d-3A0A075B695 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9d-3A0A075B695 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Trav9d-3A0A075B695 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9d-3A0A075B695 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9d-3A0A075B695 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav9d-3A0A075B695 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav9d-3A0A075B695 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav9d-3A0A075B695 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav9d-3A0A075B695 Gm43403-201ENSMUST00000198011 1786 ntBASIC14.71□□□□□ -0.05
Trav9d-3A0A075B695 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav9d-3A0A075B695 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav9d-3A0A075B695 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav9d-3A0A075B695 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC14.71□□□□□ -0.05
Trav9d-3A0A075B695 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC14.71□□□□□ -0.05
Trav9d-3A0A075B695 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav9d-3A0A075B695 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav9d-3A0A075B695 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav9d-3A0A075B695 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav9d-3A0A075B695 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9d-3A0A075B695 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9d-3A0A075B695 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9d-3A0A075B695 Gm38160-201ENSMUST00000193090 2499 ntBASIC14.7□□□□□ -0.06
Trav9d-3A0A075B695 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9d-3A0A075B695 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trav9d-3A0A075B695 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9d-3A0A075B695 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9d-3A0A075B695 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9d-3A0A075B695 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9d-3A0A075B695 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9d-3A0A075B695 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9d-3A0A075B695 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 113.1 ms