Protein–RNA interactions for Protein: A0A075B657

Trdv1, T cell receptor delta variable 1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv1A0A075B657 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Trdv1A0A075B657 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trdv1A0A075B657 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trdv1A0A075B657 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trdv1A0A075B657 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trdv1A0A075B657 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trdv1A0A075B657 AC116713.1-201ENSMUST00000215074 430 ntBASIC15.8■□□□□ 0.12
Trdv1A0A075B657 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trdv1A0A075B657 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trdv1A0A075B657 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trdv1A0A075B657 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trdv1A0A075B657 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trdv1A0A075B657 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trdv1A0A075B657 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trdv1A0A075B657 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trdv1A0A075B657 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trdv1A0A075B657 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trdv1A0A075B657 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.79■□□□□ 0.12
Trdv1A0A075B657 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Trdv1A0A075B657 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trdv1A0A075B657 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trdv1A0A075B657 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Trdv1A0A075B657 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trdv1A0A075B657 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trdv1A0A075B657 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trdv1A0A075B657 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trdv1A0A075B657 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trdv1A0A075B657 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC15.78■□□□□ 0.12
Trdv1A0A075B657 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trdv1A0A075B657 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trdv1A0A075B657 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC15.78■□□□□ 0.12
Trdv1A0A075B657 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC15.78■□□□□ 0.12
Trdv1A0A075B657 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trdv1A0A075B657 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
Trdv1A0A075B657 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Trdv1A0A075B657 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trdv1A0A075B657 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trdv1A0A075B657 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trdv1A0A075B657 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.11
Trdv1A0A075B657 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Trdv1A0A075B657 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trdv1A0A075B657 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Trdv1A0A075B657 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trdv1A0A075B657 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trdv1A0A075B657 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trdv1A0A075B657 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trdv1A0A075B657 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trdv1A0A075B657 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trdv1A0A075B657 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC15.76■□□□□ 0.11
Trdv1A0A075B657 AC151971.4-201ENSMUST00000214717 704 ntBASIC15.76■□□□□ 0.11
Trdv1A0A075B657 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Trdv1A0A075B657 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trdv1A0A075B657 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Trdv1A0A075B657 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trdv1A0A075B657 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trdv1A0A075B657 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
Trdv1A0A075B657 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Trdv1A0A075B657 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trdv1A0A075B657 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trdv1A0A075B657 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trdv1A0A075B657 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trdv1A0A075B657 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trdv1A0A075B657 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trdv1A0A075B657 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trdv1A0A075B657 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC15.75■□□□□ 0.11
Trdv1A0A075B657 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Trdv1A0A075B657 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trdv1A0A075B657 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trdv1A0A075B657 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trdv1A0A075B657 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trdv1A0A075B657 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trdv1A0A075B657 Snhg20-203ENSMUST00000182811 2153 ntBASIC15.75■□□□□ 0.11
Trdv1A0A075B657 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trdv1A0A075B657 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trdv1A0A075B657 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trdv1A0A075B657 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trdv1A0A075B657 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trdv1A0A075B657 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trdv1A0A075B657 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trdv1A0A075B657 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trdv1A0A075B657 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
Trdv1A0A075B657 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trdv1A0A075B657 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trdv1A0A075B657 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trdv1A0A075B657 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trdv1A0A075B657 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trdv1A0A075B657 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trdv1A0A075B657 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trdv1A0A075B657 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trdv1A0A075B657 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trdv1A0A075B657 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trdv1A0A075B657 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Trdv1A0A075B657 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trdv1A0A075B657 Gm15043-201ENSMUST00000118843 1543 ntBASIC15.73■□□□□ 0.11
Trdv1A0A075B657 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trdv1A0A075B657 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trdv1A0A075B657 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trdv1A0A075B657 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trdv1A0A075B657 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trdv1A0A075B657 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms