Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Trav5-4A0A075B652 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav5-4A0A075B652 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav5-4A0A075B652 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav5-4A0A075B652 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav5-4A0A075B652 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.26■□□□□ 0.35
Trav5-4A0A075B652 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav5-4A0A075B652 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav5-4A0A075B652 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav5-4A0A075B652 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav5-4A0A075B652 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav5-4A0A075B652 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav5-4A0A075B652 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav5-4A0A075B652 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav5-4A0A075B652 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav5-4A0A075B652 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav5-4A0A075B652 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.25■□□□□ 0.35
Trav5-4A0A075B652 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.25■□□□□ 0.35
Trav5-4A0A075B652 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Trav5-4A0A075B652 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trav5-4A0A075B652 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.25■□□□□ 0.35
Trav5-4A0A075B652 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav5-4A0A075B652 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav5-4A0A075B652 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav5-4A0A075B652 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav5-4A0A075B652 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.25■□□□□ 0.35
Trav5-4A0A075B652 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav5-4A0A075B652 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Trav5-4A0A075B652 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.24■□□□□ 0.35
Trav5-4A0A075B652 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trav5-4A0A075B652 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav5-4A0A075B652 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav5-4A0A075B652 Iqck-206ENSMUST00000208658 2891 ntBASIC17.24■□□□□ 0.35
Trav5-4A0A075B652 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav5-4A0A075B652 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav5-4A0A075B652 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav5-4A0A075B652 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav5-4A0A075B652 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav5-4A0A075B652 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.23■□□□□ 0.35
Trav5-4A0A075B652 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Trav5-4A0A075B652 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav5-4A0A075B652 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.23■□□□□ 0.35
Trav5-4A0A075B652 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.22■□□□□ 0.35
Trav5-4A0A075B652 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav5-4A0A075B652 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav5-4A0A075B652 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav5-4A0A075B652 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav5-4A0A075B652 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Trav5-4A0A075B652 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
Trav5-4A0A075B652 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav5-4A0A075B652 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav5-4A0A075B652 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav5-4A0A075B652 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav5-4A0A075B652 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav5-4A0A075B652 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Trav5-4A0A075B652 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav5-4A0A075B652 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav5-4A0A075B652 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.21■□□□□ 0.35
Trav5-4A0A075B652 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav5-4A0A075B652 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Trav5-4A0A075B652 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav5-4A0A075B652 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav5-4A0A075B652 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Trav5-4A0A075B652 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav5-4A0A075B652 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav5-4A0A075B652 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav5-4A0A075B652 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav5-4A0A075B652 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Trav5-4A0A075B652 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.2■□□□□ 0.34
Trav5-4A0A075B652 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav5-4A0A075B652 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav5-4A0A075B652 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav5-4A0A075B652 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav5-4A0A075B652 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.19■□□□□ 0.34
Trav5-4A0A075B652 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav5-4A0A075B652 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav5-4A0A075B652 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav5-4A0A075B652 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.19■□□□□ 0.34
Trav5-4A0A075B652 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav5-4A0A075B652 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav5-4A0A075B652 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Trav5-4A0A075B652 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav5-4A0A075B652 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav5-4A0A075B652 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav5-4A0A075B652 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav5-4A0A075B652 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav5-4A0A075B652 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Trav5-4A0A075B652 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.18■□□□□ 0.34
Trav5-4A0A075B652 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav5-4A0A075B652 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trav5-4A0A075B652 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.17■□□□□ 0.34
Trav5-4A0A075B652 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav5-4A0A075B652 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav5-4A0A075B652 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav5-4A0A075B652 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Trav5-4A0A075B652 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.17■□□□□ 0.34
Trav5-4A0A075B652 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav5-4A0A075B652 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trav5-4A0A075B652 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav5-4A0A075B652 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms