Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13-2A0A075B649 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trav13-2A0A075B649 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13-2A0A075B649 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13-2A0A075B649 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trav13-2A0A075B649 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13-2A0A075B649 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13-2A0A075B649 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13-2A0A075B649 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13-2A0A075B649 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13-2A0A075B649 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trav13-2A0A075B649 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13-2A0A075B649 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13-2A0A075B649 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13-2A0A075B649 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13-2A0A075B649 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13-2A0A075B649 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13-2A0A075B649 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13-2A0A075B649 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13-2A0A075B649 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Trav13-2A0A075B649 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13-2A0A075B649 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trav13-2A0A075B649 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13-2A0A075B649 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13-2A0A075B649 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13-2A0A075B649 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav13-2A0A075B649 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav13-2A0A075B649 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13-2A0A075B649 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC13.87□□□□□ -0.19
Trav13-2A0A075B649 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13-2A0A075B649 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC13.87□□□□□ -0.19
Trav13-2A0A075B649 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13-2A0A075B649 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav13-2A0A075B649 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13-2A0A075B649 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13-2A0A075B649 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13-2A0A075B649 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13-2A0A075B649 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13-2A0A075B649 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13-2A0A075B649 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13-2A0A075B649 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13-2A0A075B649 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13-2A0A075B649 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trav13-2A0A075B649 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trav13-2A0A075B649 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trav13-2A0A075B649 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13-2A0A075B649 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trav13-2A0A075B649 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trav13-2A0A075B649 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13-2A0A075B649 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13-2A0A075B649 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13-2A0A075B649 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13-2A0A075B649 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13-2A0A075B649 Kdm3b-204ENSMUST00000224715 2032 ntBASIC13.85□□□□□ -0.19
Trav13-2A0A075B649 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13-2A0A075B649 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13-2A0A075B649 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13-2A0A075B649 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13-2A0A075B649 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trav13-2A0A075B649 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13-2A0A075B649 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13-2A0A075B649 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Trav13-2A0A075B649 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13-2A0A075B649 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13-2A0A075B649 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13-2A0A075B649 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC13.84□□□□□ -0.19
Trav13-2A0A075B649 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC13.84□□□□□ -0.19
Trav13-2A0A075B649 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13-2A0A075B649 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trav13-2A0A075B649 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13-2A0A075B649 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13-2A0A075B649 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13-2A0A075B649 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trav13-2A0A075B649 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13-2A0A075B649 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trav13-2A0A075B649 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13-2A0A075B649 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav13-2A0A075B649 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav13-2A0A075B649 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav13-2A0A075B649 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.19
Trav13-2A0A075B649 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13-2A0A075B649 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13-2A0A075B649 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13-2A0A075B649 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC13.83□□□□□ -0.2
Trav13-2A0A075B649 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13-2A0A075B649 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Trav13-2A0A075B649 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC13.83□□□□□ -0.2
Trav13-2A0A075B649 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13-2A0A075B649 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13-2A0A075B649 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13-2A0A075B649 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC13.82□□□□□ -0.2
Trav13-2A0A075B649 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13-2A0A075B649 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13-2A0A075B649 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Trav13-2A0A075B649 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
Trav13-2A0A075B649 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC13.82□□□□□ -0.2
Trav13-2A0A075B649 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13-2A0A075B649 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13-2A0A075B649 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trav13-2A0A075B649 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms