Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC15.65■□□□□ 0.1
Trav16nA0A075B634 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav16nA0A075B634 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trav16nA0A075B634 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav16nA0A075B634 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav16nA0A075B634 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trav16nA0A075B634 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trav16nA0A075B634 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav16nA0A075B634 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Trav16nA0A075B634 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav16nA0A075B634 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav16nA0A075B634 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC15.64■□□□□ 0.09
Trav16nA0A075B634 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC15.64■□□□□ 0.09
Trav16nA0A075B634 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav16nA0A075B634 Gm44949-201ENSMUST00000206423 1450 ntBASIC15.64■□□□□ 0.09
Trav16nA0A075B634 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav16nA0A075B634 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav16nA0A075B634 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav16nA0A075B634 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Trav16nA0A075B634 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav16nA0A075B634 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav16nA0A075B634 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav16nA0A075B634 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trav16nA0A075B634 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav16nA0A075B634 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC15.63■□□□□ 0.09
Trav16nA0A075B634 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC15.63■□□□□ 0.09
Trav16nA0A075B634 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav16nA0A075B634 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav16nA0A075B634 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trav16nA0A075B634 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav16nA0A075B634 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav16nA0A075B634 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav16nA0A075B634 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Trav16nA0A075B634 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav16nA0A075B634 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav16nA0A075B634 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav16nA0A075B634 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav16nA0A075B634 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Trav16nA0A075B634 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC15.62■□□□□ 0.09
Trav16nA0A075B634 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trav16nA0A075B634 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav16nA0A075B634 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trav16nA0A075B634 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC15.61■□□□□ 0.09
Trav16nA0A075B634 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC15.61■□□□□ 0.09
Trav16nA0A075B634 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav16nA0A075B634 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav16nA0A075B634 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav16nA0A075B634 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav16nA0A075B634 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav16nA0A075B634 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav16nA0A075B634 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav16nA0A075B634 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav16nA0A075B634 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav16nA0A075B634 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav16nA0A075B634 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav16nA0A075B634 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Trav16nA0A075B634 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav16nA0A075B634 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav16nA0A075B634 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav16nA0A075B634 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav16nA0A075B634 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC15.6■□□□□ 0.09
Trav16nA0A075B634 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC15.6■□□□□ 0.09
Trav16nA0A075B634 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav16nA0A075B634 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav16nA0A075B634 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav16nA0A075B634 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav16nA0A075B634 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav16nA0A075B634 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav16nA0A075B634 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
Trav16nA0A075B634 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav16nA0A075B634 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC15.59■□□□□ 0.09
Trav16nA0A075B634 Gm5987-201ENSMUST00000196433 1151 ntBASIC15.59■□□□□ 0.09
Trav16nA0A075B634 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav16nA0A075B634 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav16nA0A075B634 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav16nA0A075B634 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav16nA0A075B634 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
Trav16nA0A075B634 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav16nA0A075B634 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav16nA0A075B634 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav16nA0A075B634 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Trav16nA0A075B634 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Trav16nA0A075B634 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav16nA0A075B634 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav16nA0A075B634 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav16nA0A075B634 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC15.58■□□□□ 0.08
Trav16nA0A075B634 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav16nA0A075B634 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Trav16nA0A075B634 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav16nA0A075B634 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav16nA0A075B634 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav16nA0A075B634 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Trav16nA0A075B634 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav16nA0A075B634 Gm5913-201ENSMUST00000119397 1399 ntBASIC15.57■□□□□ 0.08
Trav16nA0A075B634 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav16nA0A075B634 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav16nA0A075B634 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav16nA0A075B634 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav16nA0A075B634 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Trav16nA0A075B634 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms