Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.38■□□□□ 0.05
Trav6-6A0A075B603 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6-6A0A075B603 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6-6A0A075B603 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6-6A0A075B603 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6-6A0A075B603 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trav6-6A0A075B603 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC15.38■□□□□ 0.05
Trav6-6A0A075B603 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6-6A0A075B603 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6-6A0A075B603 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6-6A0A075B603 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6-6A0A075B603 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6-6A0A075B603 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6-6A0A075B603 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6-6A0A075B603 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6-6A0A075B603 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6-6A0A075B603 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6-6A0A075B603 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6-6A0A075B603 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC15.36■□□□□ 0.05
Trav6-6A0A075B603 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6-6A0A075B603 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6-6A0A075B603 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC15.36■□□□□ 0.05
Trav6-6A0A075B603 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trav6-6A0A075B603 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6-6A0A075B603 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6-6A0A075B603 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6-6A0A075B603 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trav6-6A0A075B603 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6-6A0A075B603 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trav6-6A0A075B603 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6-6A0A075B603 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6-6A0A075B603 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6-6A0A075B603 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6-6A0A075B603 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6-6A0A075B603 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6-6A0A075B603 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6-6A0A075B603 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6-6A0A075B603 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6-6A0A075B603 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6-6A0A075B603 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Trav6-6A0A075B603 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trav6-6A0A075B603 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Trav6-6A0A075B603 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC15.34■□□□□ 0.05
Trav6-6A0A075B603 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trav6-6A0A075B603 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6-6A0A075B603 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6-6A0A075B603 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Trav6-6A0A075B603 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.34■□□□□ 0.05
Trav6-6A0A075B603 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6-6A0A075B603 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6-6A0A075B603 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6-6A0A075B603 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav6-6A0A075B603 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trav6-6A0A075B603 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav6-6A0A075B603 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav6-6A0A075B603 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6-6A0A075B603 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav6-6A0A075B603 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6-6A0A075B603 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6-6A0A075B603 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6-6A0A075B603 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Trav6-6A0A075B603 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6-6A0A075B603 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6-6A0A075B603 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav6-6A0A075B603 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC15.32■□□□□ 0.04
Trav6-6A0A075B603 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC15.32■□□□□ 0.04
Trav6-6A0A075B603 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6-6A0A075B603 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC15.32■□□□□ 0.04
Trav6-6A0A075B603 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6-6A0A075B603 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6-6A0A075B603 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6-6A0A075B603 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6-6A0A075B603 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6-6A0A075B603 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trav6-6A0A075B603 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6-6A0A075B603 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6-6A0A075B603 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6-6A0A075B603 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6-6A0A075B603 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trav6-6A0A075B603 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6-6A0A075B603 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav6-6A0A075B603 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trav6-6A0A075B603 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6-6A0A075B603 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6-6A0A075B603 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6-6A0A075B603 Kdm3b-204ENSMUST00000224715 2032 ntBASIC15.31■□□□□ 0.04
Trav6-6A0A075B603 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6-6A0A075B603 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6-6A0A075B603 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6-6A0A075B603 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6-6A0A075B603 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6-6A0A075B603 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Trav6-6A0A075B603 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav6-6A0A075B603 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trav6-6A0A075B603 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6-6A0A075B603 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trav6-6A0A075B603 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-6A0A075B603 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-6A0A075B603 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-6A0A075B603 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms