Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav9-1A0A075B601 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trav9-1A0A075B601 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trav9-1A0A075B601 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav9-1A0A075B601 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav9-1A0A075B601 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav9-1A0A075B601 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav9-1A0A075B601 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav9-1A0A075B601 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav9-1A0A075B601 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav9-1A0A075B601 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav9-1A0A075B601 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav9-1A0A075B601 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav9-1A0A075B601 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav9-1A0A075B601 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav9-1A0A075B601 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav9-1A0A075B601 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.18■□□□□ 0.18
Trav9-1A0A075B601 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav9-1A0A075B601 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav9-1A0A075B601 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trav9-1A0A075B601 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trav9-1A0A075B601 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav9-1A0A075B601 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav9-1A0A075B601 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trav9-1A0A075B601 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav9-1A0A075B601 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav9-1A0A075B601 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav9-1A0A075B601 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav9-1A0A075B601 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Trav9-1A0A075B601 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav9-1A0A075B601 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC16.17■□□□□ 0.18
Trav9-1A0A075B601 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav9-1A0A075B601 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav9-1A0A075B601 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Trav9-1A0A075B601 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.16■□□□□ 0.18
Trav9-1A0A075B601 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav9-1A0A075B601 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC16.16■□□□□ 0.18
Trav9-1A0A075B601 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav9-1A0A075B601 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav9-1A0A075B601 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav9-1A0A075B601 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav9-1A0A075B601 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav9-1A0A075B601 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav9-1A0A075B601 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav9-1A0A075B601 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Trav9-1A0A075B601 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.15■□□□□ 0.18
Trav9-1A0A075B601 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav9-1A0A075B601 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav9-1A0A075B601 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav9-1A0A075B601 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Trav9-1A0A075B601 Gm5067-201ENSMUST00000170449 1009 ntBASIC16.15■□□□□ 0.18
Trav9-1A0A075B601 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.15■□□□□ 0.18
Trav9-1A0A075B601 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav9-1A0A075B601 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trav9-1A0A075B601 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trav9-1A0A075B601 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Trav9-1A0A075B601 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav9-1A0A075B601 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav9-1A0A075B601 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav9-1A0A075B601 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trav9-1A0A075B601 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trav9-1A0A075B601 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav9-1A0A075B601 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Trav9-1A0A075B601 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav9-1A0A075B601 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav9-1A0A075B601 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trav9-1A0A075B601 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC16.13■□□□□ 0.17
Trav9-1A0A075B601 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav9-1A0A075B601 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trav9-1A0A075B601 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav9-1A0A075B601 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav9-1A0A075B601 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav9-1A0A075B601 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trav9-1A0A075B601 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav9-1A0A075B601 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.12■□□□□ 0.17
Trav9-1A0A075B601 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav9-1A0A075B601 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav9-1A0A075B601 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav9-1A0A075B601 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav9-1A0A075B601 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trav9-1A0A075B601 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC16.11■□□□□ 0.17
Trav9-1A0A075B601 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav9-1A0A075B601 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC16.11■□□□□ 0.17
Trav9-1A0A075B601 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav9-1A0A075B601 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav9-1A0A075B601 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav9-1A0A075B601 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav9-1A0A075B601 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trav9-1A0A075B601 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav9-1A0A075B601 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav9-1A0A075B601 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav9-1A0A075B601 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav9-1A0A075B601 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav9-1A0A075B601 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav9-1A0A075B601 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC16.09■□□□□ 0.17
Trav9-1A0A075B601 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC16.09■□□□□ 0.17
Trav9-1A0A075B601 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav9-1A0A075B601 Gm28536-201ENSMUST00000190971 1317 ntBASIC16.09■□□□□ 0.17
Trav9-1A0A075B601 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav9-1A0A075B601 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms