Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.31□□□□□ -0.6
ClcnkaQ9WUB7 Gm27243-201ENSMUST00000183964 521 ntBASIC11.31□□□□□ -0.6
ClcnkaQ9WUB7 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
ClcnkaQ9WUB7 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
ClcnkaQ9WUB7 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
ClcnkaQ9WUB7 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ClcnkaQ9WUB7 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
ClcnkaQ9WUB7 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.31□□□□□ -0.6
ClcnkaQ9WUB7 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
ClcnkaQ9WUB7 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
ClcnkaQ9WUB7 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ClcnkaQ9WUB7 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
ClcnkaQ9WUB7 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
ClcnkaQ9WUB7 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ClcnkaQ9WUB7 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ClcnkaQ9WUB7 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.31□□□□□ -0.6
ClcnkaQ9WUB7 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 Gm12314-201ENSMUST00000118104 538 ntBASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 Gm12058-201ENSMUST00000118614 437 ntBASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 Gm27023-201ENSMUST00000182372 285 ntBASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 Gm29396-201ENSMUST00000185659 716 ntBASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 Gm42693-201ENSMUST00000196779 631 ntBASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 Gm10608-202ENSMUST00000213924 676 ntBASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ClcnkaQ9WUB7 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ClcnkaQ9WUB7 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClcnkaQ9WUB7 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ClcnkaQ9WUB7 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
ClcnkaQ9WUB7 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
ClcnkaQ9WUB7 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
ClcnkaQ9WUB7 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ClcnkaQ9WUB7 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ClcnkaQ9WUB7 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ClcnkaQ9WUB7 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClcnkaQ9WUB7 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClcnkaQ9WUB7 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClcnkaQ9WUB7 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.29□□□□□ -0.6
ClcnkaQ9WUB7 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClcnkaQ9WUB7 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.29□□□□□ -0.6
ClcnkaQ9WUB7 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClcnkaQ9WUB7 Gm13875-201ENSMUST00000120162 282 ntBASIC11.29□□□□□ -0.6
ClcnkaQ9WUB7 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.29□□□□□ -0.6
ClcnkaQ9WUB7 Gm13786-201ENSMUST00000122371 333 ntBASIC11.29□□□□□ -0.6
ClcnkaQ9WUB7 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ClcnkaQ9WUB7 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
ClcnkaQ9WUB7 Gm2546-201ENSMUST00000182630 991 ntBASIC11.29□□□□□ -0.6
ClcnkaQ9WUB7 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.29□□□□□ -0.6
ClcnkaQ9WUB7 Gm18304-201ENSMUST00000189162 546 ntBASIC11.29□□□□□ -0.6
ClcnkaQ9WUB7 Gm37201-201ENSMUST00000191845 523 ntBASIC11.29□□□□□ -0.6
ClcnkaQ9WUB7 Gm37489-201ENSMUST00000191883 159 ntBASIC11.29□□□□□ -0.6
ClcnkaQ9WUB7 Gm35960-201ENSMUST00000202712 767 ntBASIC11.29□□□□□ -0.6
ClcnkaQ9WUB7 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
ClcnkaQ9WUB7 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.29□□□□□ -0.6
ClcnkaQ9WUB7 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC11.29□□□□□ -0.6
ClcnkaQ9WUB7 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.29□□□□□ -0.6
ClcnkaQ9WUB7 Gm10076-201ENSMUST00000073238 384 ntBASIC11.29□□□□□ -0.6
ClcnkaQ9WUB7 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
ClcnkaQ9WUB7 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
ClcnkaQ9WUB7 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms