Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.36□□□□□ -0.43
Sf3a3Q9D554 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sf3a3Q9D554 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.35□□□□□ -0.43
Sf3a3Q9D554 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sf3a3Q9D554 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Sf3a3Q9D554 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Sf3a3Q9D554 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sf3a3Q9D554 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sf3a3Q9D554 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sf3a3Q9D554 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Sf3a3Q9D554 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Sf3a3Q9D554 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sf3a3Q9D554 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.35□□□□□ -0.43
Sf3a3Q9D554 Gm10576-201ENSMUST00000191927 825 ntBASIC12.35□□□□□ -0.43
Sf3a3Q9D554 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.35□□□□□ -0.43
Sf3a3Q9D554 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.35□□□□□ -0.43
Sf3a3Q9D554 Gm7730-201ENSMUST00000212486 454 ntBASIC12.35□□□□□ -0.43
Sf3a3Q9D554 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.35□□□□□ -0.43
Sf3a3Q9D554 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sf3a3Q9D554 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sf3a3Q9D554 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.35□□□□□ -0.43
Sf3a3Q9D554 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sf3a3Q9D554 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sf3a3Q9D554 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sf3a3Q9D554 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sf3a3Q9D554 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Sf3a3Q9D554 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sf3a3Q9D554 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Sf3a3Q9D554 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Sf3a3Q9D554 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Sf3a3Q9D554 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sf3a3Q9D554 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sf3a3Q9D554 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sf3a3Q9D554 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC12.35□□□□□ -0.43
Sf3a3Q9D554 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Gm37368-201ENSMUST00000193173 3212 ntBASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Gm14704-201ENSMUST00000120300 874 ntBASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Gm20445-201ENSMUST00000061905 565 ntBASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3a3Q9D554 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Sf3a3Q9D554 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Sf3a3Q9D554 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Sf3a3Q9D554 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sf3a3Q9D554 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC12.33□□□□□ -0.44
Sf3a3Q9D554 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sf3a3Q9D554 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms