Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtn4Q99P72 Gm38049-201ENSMUST00000195698 1372 ntBASIC16.26■□□□□ 0.19
Rtn4Q99P72 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtn4Q99P72 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtn4Q99P72 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Rtn4Q99P72 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtn4Q99P72 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Rtn4Q99P72 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtn4Q99P72 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Rtn4Q99P72 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rtn4Q99P72 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtn4Q99P72 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtn4Q99P72 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtn4Q99P72 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Rtn4Q99P72 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtn4Q99P72 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtn4Q99P72 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Rtn4Q99P72 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rtn4Q99P72 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Rtn4Q99P72 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rtn4Q99P72 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC16.26■□□□□ 0.19
Rtn4Q99P72 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rtn4Q99P72 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC16.26■□□□□ 0.19
Rtn4Q99P72 Gm5896-201ENSMUST00000189662 1024 ntBASIC16.26■□□□□ 0.19
Rtn4Q99P72 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtn4Q99P72 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC16.26■□□□□ 0.19
Rtn4Q99P72 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rtn4Q99P72 Gm43118-201ENSMUST00000199149 775 ntBASIC16.26■□□□□ 0.19
Rtn4Q99P72 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC16.26■□□□□ 0.19
Rtn4Q99P72 Gm19169-201ENSMUST00000220109 1246 ntBASIC16.26■□□□□ 0.19
Rtn4Q99P72 Gm4935-201ENSMUST00000221316 1198 ntBASIC16.26■□□□□ 0.19
Rtn4Q99P72 AC134335.2-201ENSMUST00000227660 440 ntBASIC16.26■□□□□ 0.19
Rtn4Q99P72 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtn4Q99P72 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtn4Q99P72 Wfdc12-201ENSMUST00000051272 775 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtn4Q99P72 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtn4Q99P72 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Rtn4Q99P72 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtn4Q99P72 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC16.26■□□□□ 0.19
Rtn4Q99P72 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Rtn4Q99P72 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Rtn4Q99P72 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtn4Q99P72 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rtn4Q99P72 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rtn4Q99P72 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtn4Q99P72 AC096628.2-201ENSMUST00000225443 1413 ntBASIC16.26■□□□□ 0.19
Rtn4Q99P72 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtn4Q99P72 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtn4Q99P72 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtn4Q99P72 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Rtn4Q99P72 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtn4Q99P72 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtn4Q99P72 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Rtn4Q99P72 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtn4Q99P72 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rtn4Q99P72 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtn4Q99P72 Gm15897-201ENSMUST00000117770 1486 ntBASIC16.25■□□□□ 0.19
Rtn4Q99P72 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtn4Q99P72 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Rtn4Q99P72 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC16.25■□□□□ 0.19
Rtn4Q99P72 Gm6023-201ENSMUST00000118217 606 ntBASIC16.25■□□□□ 0.19
Rtn4Q99P72 Gm29640-201ENSMUST00000187972 278 ntBASIC16.25■□□□□ 0.19
Rtn4Q99P72 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC16.25■□□□□ 0.19
Rtn4Q99P72 Gm42619-201ENSMUST00000197564 1136 ntBASIC16.25■□□□□ 0.19
Rtn4Q99P72 Gm44364-201ENSMUST00000198368 141 ntBASIC16.25■□□□□ 0.19
Rtn4Q99P72 Gm43946-201ENSMUST00000204058 886 ntBASIC16.25■□□□□ 0.19
Rtn4Q99P72 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC16.25■□□□□ 0.19
Rtn4Q99P72 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtn4Q99P72 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rtn4Q99P72 Gm19163-201ENSMUST00000223313 780 ntBASIC16.25■□□□□ 0.19
Rtn4Q99P72 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtn4Q99P72 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtn4Q99P72 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtn4Q99P72 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Rtn4Q99P72 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtn4Q99P72 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rtn4Q99P72 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtn4Q99P72 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rtn4Q99P72 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Rtn4Q99P72 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtn4Q99P72 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rtn4Q99P72 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtn4Q99P72 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtn4Q99P72 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtn4Q99P72 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtn4Q99P72 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Rtn4Q99P72 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rtn4Q99P72 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtn4Q99P72 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtn4Q99P72 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtn4Q99P72 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtn4Q99P72 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtn4Q99P72 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtn4Q99P72 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Rtn4Q99P72 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtn4Q99P72 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtn4Q99P72 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rtn4Q99P72 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rtn4Q99P72 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtn4Q99P72 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms