Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nkx6-1Q99MA9 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Nkx6-1Q99MA9 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nkx6-1Q99MA9 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nkx6-1Q99MA9 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Nkx6-1Q99MA9 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Nkx6-1Q99MA9 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nkx6-1Q99MA9 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx6-1Q99MA9 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.52□□□□□ -0.57
Nkx6-1Q99MA9 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx6-1Q99MA9 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.52□□□□□ -0.57
Nkx6-1Q99MA9 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.52□□□□□ -0.57
Nkx6-1Q99MA9 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Nkx6-1Q99MA9 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.52□□□□□ -0.57
Nkx6-1Q99MA9 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx6-1Q99MA9 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.52□□□□□ -0.57
Nkx6-1Q99MA9 Gm11451-201ENSMUST00000118946 630 ntBASIC11.52□□□□□ -0.57
Nkx6-1Q99MA9 Gm12628-201ENSMUST00000122193 382 ntBASIC11.52□□□□□ -0.57
Nkx6-1Q99MA9 Gm13182-201ENSMUST00000122241 312 ntBASIC11.52□□□□□ -0.57
Nkx6-1Q99MA9 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx6-1Q99MA9 Gm23771-201ENSMUST00000178702 110 ntBASIC11.52□□□□□ -0.57
Nkx6-1Q99MA9 Gm44958-201ENSMUST00000203734 736 ntBASIC11.52□□□□□ -0.57
Nkx6-1Q99MA9 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx6-1Q99MA9 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC11.52□□□□□ -0.57
Nkx6-1Q99MA9 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC11.52□□□□□ -0.57
Nkx6-1Q99MA9 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC11.52□□□□□ -0.57
Nkx6-1Q99MA9 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.52□□□□□ -0.57
Nkx6-1Q99MA9 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx6-1Q99MA9 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx6-1Q99MA9 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx6-1Q99MA9 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx6-1Q99MA9 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Nkx6-1Q99MA9 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx6-1Q99MA9 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx6-1Q99MA9 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx6-1Q99MA9 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx6-1Q99MA9 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Nkx6-1Q99MA9 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx6-1Q99MA9 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx6-1Q99MA9 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx6-1Q99MA9 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx6-1Q99MA9 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx6-1Q99MA9 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx6-1Q99MA9 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx6-1Q99MA9 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Nkx6-1Q99MA9 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.52□□□□□ -0.57
Nkx6-1Q99MA9 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Nkx6-1Q99MA9 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx6-1Q99MA9 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-1Q99MA9 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.51□□□□□ -0.57
Nkx6-1Q99MA9 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-1Q99MA9 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.51□□□□□ -0.57
Nkx6-1Q99MA9 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Nkx6-1Q99MA9 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-1Q99MA9 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Nkx6-1Q99MA9 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-1Q99MA9 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Nkx6-1Q99MA9 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-1Q99MA9 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.51□□□□□ -0.57
Nkx6-1Q99MA9 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-1Q99MA9 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC11.51□□□□□ -0.57
Nkx6-1Q99MA9 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC11.51□□□□□ -0.57
Nkx6-1Q99MA9 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC11.51□□□□□ -0.57
Nkx6-1Q99MA9 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-1Q99MA9 Gm25116-201ENSMUST00000157191 122 ntBASIC11.51□□□□□ -0.57
Nkx6-1Q99MA9 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-1Q99MA9 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-1Q99MA9 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.51□□□□□ -0.57
Nkx6-1Q99MA9 Gm5542-201ENSMUST00000195485 1089 ntBASIC11.51□□□□□ -0.57
Nkx6-1Q99MA9 Gm17889-201ENSMUST00000198410 598 ntBASIC11.51□□□□□ -0.57
Nkx6-1Q99MA9 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-1Q99MA9 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.51□□□□□ -0.57
Nkx6-1Q99MA9 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-1Q99MA9 AC154184.3-201ENSMUST00000225620 1090 ntBASIC11.51□□□□□ -0.57
Nkx6-1Q99MA9 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-1Q99MA9 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.51□□□□□ -0.57
Nkx6-1Q99MA9 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Nkx6-1Q99MA9 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-1Q99MA9 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-1Q99MA9 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-1Q99MA9 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-1Q99MA9 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-1Q99MA9 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-1Q99MA9 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-1Q99MA9 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-1Q99MA9 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx6-1Q99MA9 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms