Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TraipQ8VIG6 Cir1-201ENSMUST00000058615 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TraipQ8VIG6 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TraipQ8VIG6 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TraipQ8VIG6 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TraipQ8VIG6 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC13.11□□□□□ -0.31
TraipQ8VIG6 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TraipQ8VIG6 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TraipQ8VIG6 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.11□□□□□ -0.31
TraipQ8VIG6 Gm4482-201ENSMUST00000200876 742 ntBASIC13.11□□□□□ -0.31
TraipQ8VIG6 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TraipQ8VIG6 Gm4607-201ENSMUST00000206649 577 ntBASIC13.11□□□□□ -0.31
TraipQ8VIG6 Gm4157-201ENSMUST00000211647 679 ntBASIC13.11□□□□□ -0.31
TraipQ8VIG6 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC13.11□□□□□ -0.31
TraipQ8VIG6 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TraipQ8VIG6 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TraipQ8VIG6 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TraipQ8VIG6 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
TraipQ8VIG6 Gm9361-201ENSMUST00000198695 1507 ntBASIC13.11□□□□□ -0.31
TraipQ8VIG6 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TraipQ8VIG6 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TraipQ8VIG6 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TraipQ8VIG6 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TraipQ8VIG6 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TraipQ8VIG6 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.11□□□□□ -0.31
TraipQ8VIG6 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TraipQ8VIG6 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TraipQ8VIG6 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TraipQ8VIG6 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TraipQ8VIG6 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TraipQ8VIG6 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
TraipQ8VIG6 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TraipQ8VIG6 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TraipQ8VIG6 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
TraipQ8VIG6 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TraipQ8VIG6 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TraipQ8VIG6 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TraipQ8VIG6 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TraipQ8VIG6 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC13.1□□□□□ -0.31
TraipQ8VIG6 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC13.1□□□□□ -0.31
TraipQ8VIG6 Gm14724-201ENSMUST00000118400 537 ntBASIC13.1□□□□□ -0.31
TraipQ8VIG6 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC13.1□□□□□ -0.31
TraipQ8VIG6 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TraipQ8VIG6 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC13.1□□□□□ -0.31
TraipQ8VIG6 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
TraipQ8VIG6 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TraipQ8VIG6 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TraipQ8VIG6 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TraipQ8VIG6 Gm7207-201ENSMUST00000211575 1067 ntBASIC13.1□□□□□ -0.31
TraipQ8VIG6 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TraipQ8VIG6 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
TraipQ8VIG6 Gm21811-201ENSMUST00000096485 930 ntBASIC13.1□□□□□ -0.31
TraipQ8VIG6 Tmem260-202ENSMUST00000124720 3035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TraipQ8VIG6 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TraipQ8VIG6 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TraipQ8VIG6 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.1□□□□□ -0.31
TraipQ8VIG6 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
TraipQ8VIG6 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TraipQ8VIG6 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TraipQ8VIG6 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.1□□□□□ -0.31
TraipQ8VIG6 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
TraipQ8VIG6 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
TraipQ8VIG6 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.1□□□□□ -0.31
TraipQ8VIG6 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
TraipQ8VIG6 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TraipQ8VIG6 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TraipQ8VIG6 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TraipQ8VIG6 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TraipQ8VIG6 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TraipQ8VIG6 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TraipQ8VIG6 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
TraipQ8VIG6 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TraipQ8VIG6 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TraipQ8VIG6 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TraipQ8VIG6 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
TraipQ8VIG6 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TraipQ8VIG6 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TraipQ8VIG6 0610040B10Rik-203ENSMUST00000198455 1643 ntBASIC13.1□□□□□ -0.31
TraipQ8VIG6 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TraipQ8VIG6 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TraipQ8VIG6 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TraipQ8VIG6 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TraipQ8VIG6 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TraipQ8VIG6 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TraipQ8VIG6 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TraipQ8VIG6 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TraipQ8VIG6 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TraipQ8VIG6 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TraipQ8VIG6 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TraipQ8VIG6 Gm23596-201ENSMUST00000104304 132 ntBASIC13.09□□□□□ -0.31
TraipQ8VIG6 Gm13035-201ENSMUST00000117496 342 ntBASIC13.09□□□□□ -0.31
TraipQ8VIG6 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC13.09□□□□□ -0.31
TraipQ8VIG6 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC13.09□□□□□ -0.31
TraipQ8VIG6 Gm23085-201ENSMUST00000157849 293 ntBASIC13.09□□□□□ -0.31
TraipQ8VIG6 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TraipQ8VIG6 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
TraipQ8VIG6 Gm8546-201ENSMUST00000178288 1264 ntBASIC13.09□□□□□ -0.31
TraipQ8VIG6 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TraipQ8VIG6 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC13.09□□□□□ -0.31
TraipQ8VIG6 Gm42629-201ENSMUST00000199063 1102 ntBASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms