Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cd109Q8R422 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cd109Q8R422 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cd109Q8R422 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Cd109Q8R422 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cd109Q8R422 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Cd109Q8R422 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cd109Q8R422 Gm18198-201ENSMUST00000204986 1551 ntBASIC17.2■□□□□ 0.34
Cd109Q8R422 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cd109Q8R422 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cd109Q8R422 CT009489.1-201ENSMUST00000227740 1893 ntBASIC17.2■□□□□ 0.34
Cd109Q8R422 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cd109Q8R422 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cd109Q8R422 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Cd109Q8R422 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cd109Q8R422 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cd109Q8R422 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Cd109Q8R422 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cd109Q8R422 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cd109Q8R422 Gm8194-201ENSMUST00000159783 859 ntBASIC17.2■□□□□ 0.34
Cd109Q8R422 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Cd109Q8R422 Gm37905-201ENSMUST00000195310 341 ntBASIC17.2■□□□□ 0.34
Cd109Q8R422 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC17.2■□□□□ 0.34
Cd109Q8R422 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cd109Q8R422 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cd109Q8R422 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Cd109Q8R422 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Cd109Q8R422 Gm5380-201ENSMUST00000119296 2136 ntBASIC17.2■□□□□ 0.34
Cd109Q8R422 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC17.2■□□□□ 0.34
Cd109Q8R422 Map1b-203ENSMUST00000223725 2669 ntBASIC17.2■□□□□ 0.34
Cd109Q8R422 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cd109Q8R422 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cd109Q8R422 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cd109Q8R422 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cd109Q8R422 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Cd109Q8R422 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Cd109Q8R422 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cd109Q8R422 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cd109Q8R422 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC17.19■□□□□ 0.34
Cd109Q8R422 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Cd109Q8R422 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cd109Q8R422 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC17.19■□□□□ 0.34
Cd109Q8R422 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cd109Q8R422 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cd109Q8R422 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cd109Q8R422 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC17.19■□□□□ 0.34
Cd109Q8R422 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cd109Q8R422 Gm44124-201ENSMUST00000204159 472 ntBASIC17.19■□□□□ 0.34
Cd109Q8R422 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC17.19■□□□□ 0.34
Cd109Q8R422 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC17.19■□□□□ 0.34
Cd109Q8R422 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC17.19■□□□□ 0.34
Cd109Q8R422 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cd109Q8R422 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cd109Q8R422 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Cd109Q8R422 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cd109Q8R422 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cd109Q8R422 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cd109Q8R422 Gm9796-201ENSMUST00000062249 2250 ntBASIC17.18■□□□□ 0.34
Cd109Q8R422 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cd109Q8R422 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Cd109Q8R422 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cd109Q8R422 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC17.18■□□□□ 0.34
Cd109Q8R422 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cd109Q8R422 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cd109Q8R422 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cd109Q8R422 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Cd109Q8R422 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC17.18■□□□□ 0.34
Cd109Q8R422 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cd109Q8R422 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Cd109Q8R422 Gm25076-201ENSMUST00000104098 132 ntBASIC17.18■□□□□ 0.34
Cd109Q8R422 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cd109Q8R422 Selenot-ps-201ENSMUST00000119098 593 ntBASIC17.18■□□□□ 0.34
Cd109Q8R422 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cd109Q8R422 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC17.18■□□□□ 0.34
Cd109Q8R422 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cd109Q8R422 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cd109Q8R422 Gm27910-201ENSMUST00000185004 107 ntBASIC17.18■□□□□ 0.34
Cd109Q8R422 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cd109Q8R422 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cd109Q8R422 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Cd109Q8R422 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cd109Q8R422 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cd109Q8R422 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cd109Q8R422 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cd109Q8R422 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Cd109Q8R422 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cd109Q8R422 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cd109Q8R422 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Cd109Q8R422 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Cd109Q8R422 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cd109Q8R422 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cd109Q8R422 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Cd109Q8R422 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cd109Q8R422 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cd109Q8R422 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Cd109Q8R422 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cd109Q8R422 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cd109Q8R422 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cd109Q8R422 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC17.17■□□□□ 0.34
Cd109Q8R422 Gm11451-201ENSMUST00000118946 630 ntBASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms