Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm27514-201ENSMUST00000183692 110 ntBASIC14.46□□□□□ -0.09
Cchcr1Q8K2I2 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cchcr1Q8K2I2 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC14.46□□□□□ -0.09
Cchcr1Q8K2I2 AC166095.1-201ENSMUST00000223731 1241 ntBASIC14.46□□□□□ -0.09
Cchcr1Q8K2I2 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cchcr1Q8K2I2 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cchcr1Q8K2I2 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cchcr1Q8K2I2 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cchcr1Q8K2I2 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cchcr1Q8K2I2 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cchcr1Q8K2I2 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cchcr1Q8K2I2 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cchcr1Q8K2I2 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cchcr1Q8K2I2 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cchcr1Q8K2I2 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cchcr1Q8K2I2 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Cchcr1Q8K2I2 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cchcr1Q8K2I2 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cchcr1Q8K2I2 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cchcr1Q8K2I2 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cchcr1Q8K2I2 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cchcr1Q8K2I2 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC14.45□□□□□ -0.1
Cchcr1Q8K2I2 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cchcr1Q8K2I2 Gm13142-201ENSMUST00000117213 1453 ntBASIC14.45□□□□□ -0.1
Cchcr1Q8K2I2 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC14.45□□□□□ -0.1
Cchcr1Q8K2I2 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cchcr1Q8K2I2 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cchcr1Q8K2I2 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Cchcr1Q8K2I2 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cchcr1Q8K2I2 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC14.45□□□□□ -0.1
Cchcr1Q8K2I2 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cchcr1Q8K2I2 Gm12036-201ENSMUST00000120008 530 ntBASIC14.45□□□□□ -0.1
Cchcr1Q8K2I2 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC14.45□□□□□ -0.1
Cchcr1Q8K2I2 Gm13316-201ENSMUST00000140537 691 ntBASIC14.45□□□□□ -0.1
Cchcr1Q8K2I2 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cchcr1Q8K2I2 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC14.45□□□□□ -0.1
Cchcr1Q8K2I2 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC14.45□□□□□ -0.1
Cchcr1Q8K2I2 Gm42937-201ENSMUST00000197360 752 ntBASIC14.45□□□□□ -0.1
Cchcr1Q8K2I2 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC14.45□□□□□ -0.1
Cchcr1Q8K2I2 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC14.45□□□□□ -0.1
Cchcr1Q8K2I2 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cchcr1Q8K2I2 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cchcr1Q8K2I2 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cchcr1Q8K2I2 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cchcr1Q8K2I2 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cchcr1Q8K2I2 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Cchcr1Q8K2I2 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cchcr1Q8K2I2 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cchcr1Q8K2I2 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cchcr1Q8K2I2 Gm18782-201ENSMUST00000209023 1399 ntBASIC14.45□□□□□ -0.1
Cchcr1Q8K2I2 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cchcr1Q8K2I2 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cchcr1Q8K2I2 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cchcr1Q8K2I2 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cchcr1Q8K2I2 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cchcr1Q8K2I2 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Cchcr1Q8K2I2 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cchcr1Q8K2I2 Gm43174-201ENSMUST00000195914 2445 ntBASIC14.44□□□□□ -0.1
Cchcr1Q8K2I2 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC14.44□□□□□ -0.1
Cchcr1Q8K2I2 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cchcr1Q8K2I2 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cchcr1Q8K2I2 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cchcr1Q8K2I2 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cchcr1Q8K2I2 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cchcr1Q8K2I2 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cchcr1Q8K2I2 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cchcr1Q8K2I2 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cchcr1Q8K2I2 Gm6023-201ENSMUST00000118217 606 ntBASIC14.44□□□□□ -0.1
Cchcr1Q8K2I2 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cchcr1Q8K2I2 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC14.44□□□□□ -0.1
Cchcr1Q8K2I2 Gm37008-201ENSMUST00000195712 319 ntBASIC14.44□□□□□ -0.1
Cchcr1Q8K2I2 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cchcr1Q8K2I2 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC14.44□□□□□ -0.1
Cchcr1Q8K2I2 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cchcr1Q8K2I2 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cchcr1Q8K2I2 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Cchcr1Q8K2I2 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC14.44□□□□□ -0.1
Cchcr1Q8K2I2 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cchcr1Q8K2I2 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cchcr1Q8K2I2 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cchcr1Q8K2I2 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cchcr1Q8K2I2 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cchcr1Q8K2I2 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cchcr1Q8K2I2 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cchcr1Q8K2I2 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cchcr1Q8K2I2 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Cchcr1Q8K2I2 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Cchcr1Q8K2I2 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cchcr1Q8K2I2 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cchcr1Q8K2I2 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cchcr1Q8K2I2 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC14.44□□□□□ -0.1
Cchcr1Q8K2I2 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cchcr1Q8K2I2 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC14.43□□□□□ -0.1
Cchcr1Q8K2I2 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cchcr1Q8K2I2 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cchcr1Q8K2I2 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC14.43□□□□□ -0.1
Cchcr1Q8K2I2 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cchcr1Q8K2I2 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC14.43□□□□□ -0.1
Cchcr1Q8K2I2 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Cchcr1Q8K2I2 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms