Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Gm24136-201ENSMUST00000083374 165 ntBASIC12.54□□□□□ -0.4
Sfr1Q8BP27 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Sfr1Q8BP27 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Sfr1Q8BP27 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sfr1Q8BP27 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sfr1Q8BP27 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Sfr1Q8BP27 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.54□□□□□ -0.4
Sfr1Q8BP27 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sfr1Q8BP27 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sfr1Q8BP27 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Sfr1Q8BP27 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sfr1Q8BP27 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sfr1Q8BP27 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Sfr1Q8BP27 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sfr1Q8BP27 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sfr1Q8BP27 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sfr1Q8BP27 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sfr1Q8BP27 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sfr1Q8BP27 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sfr1Q8BP27 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sfr1Q8BP27 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sfr1Q8BP27 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Sfr1Q8BP27 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Sfr1Q8BP27 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sfr1Q8BP27 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.52□□□□□ -0.4
Sfr1Q8BP27 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.52□□□□□ -0.4
Sfr1Q8BP27 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sfr1Q8BP27 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sfr1Q8BP27 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sfr1Q8BP27 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sfr1Q8BP27 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sfr1Q8BP27 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Sfr1Q8BP27 Gm24255-201ENSMUST00000104481 128 ntBASIC12.52□□□□□ -0.41
Sfr1Q8BP27 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Sfr1Q8BP27 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.52□□□□□ -0.41
Sfr1Q8BP27 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Sfr1Q8BP27 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.52□□□□□ -0.41
Sfr1Q8BP27 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.52□□□□□ -0.41
Sfr1Q8BP27 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sfr1Q8BP27 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Sfr1Q8BP27 Gm28882-201ENSMUST00000185504 314 ntBASIC12.52□□□□□ -0.41
Sfr1Q8BP27 Gm44958-201ENSMUST00000203734 736 ntBASIC12.52□□□□□ -0.41
Sfr1Q8BP27 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Sfr1Q8BP27 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.52□□□□□ -0.41
Sfr1Q8BP27 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.52□□□□□ -0.41
Sfr1Q8BP27 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sfr1Q8BP27 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms