Protein–RNA interactions for Protein: Q6P8X1

Snx6, Sorting nexin-6, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx6Q6P8X1 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Snx6Q6P8X1 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.73□□□□□ -0.53
Snx6Q6P8X1 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Snx6Q6P8X1 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Snx6Q6P8X1 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.73□□□□□ -0.53
Snx6Q6P8X1 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.73□□□□□ -0.53
Snx6Q6P8X1 Gm27390-201ENSMUST00000184516 176 ntBASIC11.73□□□□□ -0.53
Snx6Q6P8X1 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.73□□□□□ -0.53
Snx6Q6P8X1 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.73□□□□□ -0.53
Snx6Q6P8X1 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Snx6Q6P8X1 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.73□□□□□ -0.53
Snx6Q6P8X1 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.73□□□□□ -0.53
Snx6Q6P8X1 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.73□□□□□ -0.53
Snx6Q6P8X1 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Snx6Q6P8X1 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Snx6Q6P8X1 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Snx6Q6P8X1 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Snx6Q6P8X1 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.73□□□□□ -0.53
Snx6Q6P8X1 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Snx6Q6P8X1 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Snx6Q6P8X1 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Snx6Q6P8X1 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Snx6Q6P8X1 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Snx6Q6P8X1 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC11.73□□□□□ -0.53
Snx6Q6P8X1 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Snx6Q6P8X1 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Snx6Q6P8X1 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Snx6Q6P8X1 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Snx6Q6P8X1 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Snx6Q6P8X1 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Snx6Q6P8X1 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Snx6Q6P8X1 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Snx6Q6P8X1 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Snx6Q6P8X1 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Snx6Q6P8X1 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Snx6Q6P8X1 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Snx6Q6P8X1 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Snx6Q6P8X1 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Snx6Q6P8X1 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Snx6Q6P8X1 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Snx6Q6P8X1 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Snx6Q6P8X1 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Snx6Q6P8X1 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Snx6Q6P8X1 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.72□□□□□ -0.53
Snx6Q6P8X1 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Snx6Q6P8X1 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Snx6Q6P8X1 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Snx6Q6P8X1 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.72□□□□□ -0.53
Snx6Q6P8X1 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.72□□□□□ -0.53
Snx6Q6P8X1 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Snx6Q6P8X1 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Snx6Q6P8X1 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Snx6Q6P8X1 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Snx6Q6P8X1 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.72□□□□□ -0.53
Snx6Q6P8X1 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Snx6Q6P8X1 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Snx6Q6P8X1 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Snx6Q6P8X1 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Snx6Q6P8X1 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Snx6Q6P8X1 Gm37201-201ENSMUST00000191845 523 ntBASIC11.72□□□□□ -0.53
Snx6Q6P8X1 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.72□□□□□ -0.53
Snx6Q6P8X1 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Snx6Q6P8X1 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.72□□□□□ -0.53
Snx6Q6P8X1 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.72□□□□□ -0.53
Snx6Q6P8X1 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.72□□□□□ -0.53
Snx6Q6P8X1 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Snx6Q6P8X1 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.72□□□□□ -0.53
Snx6Q6P8X1 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Snx6Q6P8X1 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Snx6Q6P8X1 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Snx6Q6P8X1 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Snx6Q6P8X1 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Snx6Q6P8X1 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Snx6Q6P8X1 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Snx6Q6P8X1 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Snx6Q6P8X1 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Snx6Q6P8X1 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Snx6Q6P8X1 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Snx6Q6P8X1 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Snx6Q6P8X1 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Snx6Q6P8X1 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Snx6Q6P8X1 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Snx6Q6P8X1 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Snx6Q6P8X1 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.71□□□□□ -0.53
Snx6Q6P8X1 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Snx6Q6P8X1 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Snx6Q6P8X1 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.71□□□□□ -0.53
Snx6Q6P8X1 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Snx6Q6P8X1 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Snx6Q6P8X1 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Snx6Q6P8X1 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Snx6Q6P8X1 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Snx6Q6P8X1 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Snx6Q6P8X1 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Snx6Q6P8X1 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Snx6Q6P8X1 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Snx6Q6P8X1 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.71□□□□□ -0.53
Snx6Q6P8X1 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.71□□□□□ -0.53
Snx6Q6P8X1 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Snx6Q6P8X1 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 128.6 ms