Protein–RNA interactions for Protein: Q3TTP0

Shcbp1l, Testicular spindle-associated protein SHCBP1L, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shcbp1lQ3TTP0 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Shcbp1lQ3TTP0 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Shcbp1lQ3TTP0 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Shcbp1lQ3TTP0 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.39□□□□□ -0.43
Shcbp1lQ3TTP0 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shcbp1lQ3TTP0 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shcbp1lQ3TTP0 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shcbp1lQ3TTP0 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Shcbp1lQ3TTP0 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.39□□□□□ -0.43
Shcbp1lQ3TTP0 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Shcbp1lQ3TTP0 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 Gm26461-201ENSMUST00000175064 290 ntBASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 Gm9022-201ENSMUST00000182482 992 ntBASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 Gm9230-201ENSMUST00000188228 532 ntBASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.38□□□□□ -0.43
Shcbp1lQ3TTP0 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shcbp1lQ3TTP0 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shcbp1lQ3TTP0 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shcbp1lQ3TTP0 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shcbp1lQ3TTP0 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Shcbp1lQ3TTP0 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Shcbp1lQ3TTP0 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Shcbp1lQ3TTP0 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shcbp1lQ3TTP0 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Shcbp1lQ3TTP0 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shcbp1lQ3TTP0 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.37□□□□□ -0.43
Shcbp1lQ3TTP0 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shcbp1lQ3TTP0 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shcbp1lQ3TTP0 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Shcbp1lQ3TTP0 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shcbp1lQ3TTP0 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shcbp1lQ3TTP0 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shcbp1lQ3TTP0 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.37□□□□□ -0.43
Shcbp1lQ3TTP0 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Shcbp1lQ3TTP0 Gm13996-201ENSMUST00000118456 430 ntBASIC12.37□□□□□ -0.43
Shcbp1lQ3TTP0 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.37□□□□□ -0.43
Shcbp1lQ3TTP0 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Shcbp1lQ3TTP0 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shcbp1lQ3TTP0 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.37□□□□□ -0.43
Shcbp1lQ3TTP0 Gm42937-201ENSMUST00000197360 752 ntBASIC12.37□□□□□ -0.43
Shcbp1lQ3TTP0 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.37□□□□□ -0.43
Shcbp1lQ3TTP0 Rps4l-202ENSMUST00000204242 789 ntBASIC12.37□□□□□ -0.43
Shcbp1lQ3TTP0 Gm44262-201ENSMUST00000204969 372 ntBASIC12.37□□□□□ -0.43
Shcbp1lQ3TTP0 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.37□□□□□ -0.43
Shcbp1lQ3TTP0 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.37□□□□□ -0.43
Shcbp1lQ3TTP0 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shcbp1lQ3TTP0 Gm8385-201ENSMUST00000058999 643 ntBASIC12.37□□□□□ -0.43
Shcbp1lQ3TTP0 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shcbp1lQ3TTP0 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shcbp1lQ3TTP0 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Shcbp1lQ3TTP0 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Shcbp1lQ3TTP0 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shcbp1lQ3TTP0 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms