Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim7Q3TJD7 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim7Q3TJD7 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim7Q3TJD7 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim7Q3TJD7 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim7Q3TJD7 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim7Q3TJD7 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Pdlim7Q3TJD7 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Pdlim7Q3TJD7 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim7Q3TJD7 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.67□□□□□ -0.22
Pdlim7Q3TJD7 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Pdlim7Q3TJD7 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim7Q3TJD7 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim7Q3TJD7 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Pdlim7Q3TJD7 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim7Q3TJD7 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim7Q3TJD7 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Pdlim7Q3TJD7 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim7Q3TJD7 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim7Q3TJD7 Gm7278-201ENSMUST00000119836 1401 ntBASIC13.66□□□□□ -0.22
Pdlim7Q3TJD7 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.66□□□□□ -0.22
Pdlim7Q3TJD7 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Pdlim7Q3TJD7 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim7Q3TJD7 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim7Q3TJD7 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim7Q3TJD7 Gm9361-201ENSMUST00000198695 1507 ntBASIC13.66□□□□□ -0.22
Pdlim7Q3TJD7 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim7Q3TJD7 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Pdlim7Q3TJD7 Gm25076-201ENSMUST00000104098 132 ntBASIC13.66□□□□□ -0.22
Pdlim7Q3TJD7 Gm14193-201ENSMUST00000105067 153 ntBASIC13.66□□□□□ -0.22
Pdlim7Q3TJD7 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC13.66□□□□□ -0.22
Pdlim7Q3TJD7 Gm11836-201ENSMUST00000121022 441 ntBASIC13.66□□□□□ -0.22
Pdlim7Q3TJD7 Gm11980-201ENSMUST00000121445 986 ntBASIC13.66□□□□□ -0.22
Pdlim7Q3TJD7 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC13.66□□□□□ -0.22
Pdlim7Q3TJD7 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim7Q3TJD7 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC13.66□□□□□ -0.22
Pdlim7Q3TJD7 Gm8815-201ENSMUST00000173809 620 ntBASIC13.66□□□□□ -0.22
Pdlim7Q3TJD7 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim7Q3TJD7 Gm37458-201ENSMUST00000194055 410 ntBASIC13.66□□□□□ -0.22
Pdlim7Q3TJD7 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC13.66□□□□□ -0.22
Pdlim7Q3TJD7 Gm5298-201ENSMUST00000201122 892 ntBASIC13.66□□□□□ -0.22
Pdlim7Q3TJD7 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC13.66□□□□□ -0.22
Pdlim7Q3TJD7 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
Pdlim7Q3TJD7 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim7Q3TJD7 Gm9111-201ENSMUST00000219394 709 ntBASIC13.66□□□□□ -0.22
Pdlim7Q3TJD7 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC13.66□□□□□ -0.22
Pdlim7Q3TJD7 AC165260.2-203ENSMUST00000224237 336 ntBASIC13.66□□□□□ -0.22
Pdlim7Q3TJD7 AC154257.1-202ENSMUST00000224729 843 ntBASIC13.66□□□□□ -0.22
Pdlim7Q3TJD7 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Pdlim7Q3TJD7 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Pdlim7Q3TJD7 AC173482.6-201ENSMUST00000225889 1741 ntBASIC13.66□□□□□ -0.22
Pdlim7Q3TJD7 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC13.66□□□□□ -0.22
Pdlim7Q3TJD7 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim7Q3TJD7 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Pdlim7Q3TJD7 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim7Q3TJD7 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Pdlim7Q3TJD7 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim7Q3TJD7 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim7Q3TJD7 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim7Q3TJD7 Gm43267-201ENSMUST00000199664 1796 ntBASIC13.66□□□□□ -0.22
Pdlim7Q3TJD7 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim7Q3TJD7 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim7Q3TJD7 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Pdlim7Q3TJD7 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim7Q3TJD7 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim7Q3TJD7 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim7Q3TJD7 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim7Q3TJD7 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim7Q3TJD7 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim7Q3TJD7 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim7Q3TJD7 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.65□□□□□ -0.22
Pdlim7Q3TJD7 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim7Q3TJD7 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim7Q3TJD7 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim7Q3TJD7 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Pdlim7Q3TJD7 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC13.65□□□□□ -0.22
Pdlim7Q3TJD7 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim7Q3TJD7 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC13.65□□□□□ -0.22
Pdlim7Q3TJD7 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim7Q3TJD7 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC13.65□□□□□ -0.22
Pdlim7Q3TJD7 Gm44421-201ENSMUST00000205064 1221 ntBASIC13.65□□□□□ -0.22
Pdlim7Q3TJD7 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Pdlim7Q3TJD7 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Pdlim7Q3TJD7 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim7Q3TJD7 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Pdlim7Q3TJD7 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim7Q3TJD7 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim7Q3TJD7 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim7Q3TJD7 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.65□□□□□ -0.22
Pdlim7Q3TJD7 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim7Q3TJD7 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim7Q3TJD7 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim7Q3TJD7 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim7Q3TJD7 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Pdlim7Q3TJD7 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.64□□□□□ -0.23
Pdlim7Q3TJD7 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.64□□□□□ -0.23
Pdlim7Q3TJD7 Gm13910-201ENSMUST00000121752 1428 ntBASIC13.64□□□□□ -0.23
Pdlim7Q3TJD7 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim7Q3TJD7 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim7Q3TJD7 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms