Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six5P70178 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Six5P70178 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six5P70178 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six5P70178 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Six5P70178 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Six5P70178 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Six5P70178 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Six5P70178 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Six5P70178 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Six5P70178 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.46□□□□□ -0.57
Six5P70178 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.46□□□□□ -0.57
Six5P70178 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Six5P70178 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Six5P70178 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Six5P70178 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Six5P70178 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Six5P70178 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Six5P70178 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Six5P70178 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Six5P70178 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.46□□□□□ -0.57
Six5P70178 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Six5P70178 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.46□□□□□ -0.57
Six5P70178 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Six5P70178 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.46□□□□□ -0.57
Six5P70178 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Six5P70178 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Six5P70178 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Six5P70178 Mir8109-201ENSMUST00000184375 117 ntBASIC11.46□□□□□ -0.57
Six5P70178 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Six5P70178 Gm31256-201ENSMUST00000194705 506 ntBASIC11.46□□□□□ -0.57
Six5P70178 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Six5P70178 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Six5P70178 Gm19994-201ENSMUST00000217086 586 ntBASIC11.46□□□□□ -0.57
Six5P70178 Cts7-204ENSMUST00000225321 1257 ntBASIC11.46□□□□□ -0.57
Six5P70178 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.46□□□□□ -0.57
Six5P70178 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Six5P70178 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Six5P70178 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Six5P70178 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Six5P70178 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Six5P70178 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Six5P70178 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Six5P70178 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Six5P70178 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Six5P70178 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Six5P70178 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Six5P70178 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Six5P70178 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Six5P70178 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Six5P70178 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Six5P70178 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Six5P70178 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Six5P70178 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Six5P70178 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Six5P70178 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Six5P70178 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Six5P70178 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Six5P70178 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Six5P70178 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Six5P70178 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Six5P70178 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Six5P70178 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Six5P70178 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Six5P70178 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Six5P70178 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Six5P70178 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Six5P70178 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Six5P70178 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Six5P70178 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Six5P70178 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Six5P70178 Gm11930-201ENSMUST00000117788 190 ntBASIC11.45□□□□□ -0.58
Six5P70178 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Six5P70178 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.45□□□□□ -0.58
Six5P70178 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Six5P70178 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.45□□□□□ -0.58
Six5P70178 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.45□□□□□ -0.58
Six5P70178 Gm27516-201ENSMUST00000184237 98 ntBASIC11.45□□□□□ -0.58
Six5P70178 Gm3096-201ENSMUST00000185770 364 ntBASIC11.45□□□□□ -0.58
Six5P70178 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Six5P70178 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Six5P70178 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Six5P70178 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.45□□□□□ -0.58
Six5P70178 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Six5P70178 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.45□□□□□ -0.58
Six5P70178 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.45□□□□□ -0.58
Six5P70178 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Six5P70178 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Six5P70178 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Six5P70178 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Six5P70178 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Six5P70178 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Six5P70178 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Six5P70178 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Six5P70178 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Six5P70178 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.45□□□□□ -0.58
Six5P70178 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Six5P70178 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Six5P70178 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Six5P70178 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms