Protein–RNA interactions for Protein: P56399

Usp5, Ubiquitin carboxyl-terminal hydrolase 5, mousemouse

Known RBP Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp5P56399 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Usp5P56399 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Usp5P56399 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp5P56399 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC14.28□□□□□ -0.12
Usp5P56399 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp5P56399 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp5P56399 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Usp5P56399 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp5P56399 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp5P56399 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp5P56399 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC14.27□□□□□ -0.12
Usp5P56399 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp5P56399 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Usp5P56399 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp5P56399 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp5P56399 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp5P56399 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp5P56399 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp5P56399 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC14.27□□□□□ -0.12
Usp5P56399 AC113441.2-201ENSMUST00000221538 1468 ntBASIC14.27□□□□□ -0.12
Usp5P56399 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp5P56399 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp5P56399 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Usp5P56399 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Usp5P56399 Gm11989-201ENSMUST00000117240 672 ntBASIC14.27□□□□□ -0.13
Usp5P56399 Gm11362-201ENSMUST00000118838 850 ntBASIC14.27□□□□□ -0.13
Usp5P56399 Gm14208-201ENSMUST00000119645 678 ntBASIC14.27□□□□□ -0.13
Usp5P56399 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC14.27□□□□□ -0.13
Usp5P56399 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC14.27□□□□□ -0.13
Usp5P56399 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Usp5P56399 Ighv5-7-201ENSMUST00000192302 244 ntBASIC14.27□□□□□ -0.13
Usp5P56399 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC14.27□□□□□ -0.13
Usp5P56399 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp5P56399 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC14.27□□□□□ -0.13
Usp5P56399 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC14.27□□□□□ -0.13
Usp5P56399 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp5P56399 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp5P56399 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Usp5P56399 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Usp5P56399 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC14.27□□□□□ -0.13
Usp5P56399 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp5P56399 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Usp5P56399 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Usp5P56399 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp5P56399 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Usp5P56399 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Usp5P56399 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp5P56399 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp5P56399 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp5P56399 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp5P56399 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Usp5P56399 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp5P56399 Cog3-203ENSMUST00000227473 4197 ntBASIC14.26□□□□□ -0.13
Usp5P56399 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Usp5P56399 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC14.26□□□□□ -0.13
Usp5P56399 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp5P56399 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp5P56399 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Usp5P56399 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC14.26□□□□□ -0.13
Usp5P56399 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Usp5P56399 Gm11439-201ENSMUST00000118598 409 ntBASIC14.26□□□□□ -0.13
Usp5P56399 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp5P56399 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp5P56399 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC14.26□□□□□ -0.13
Usp5P56399 Gm17812-201ENSMUST00000204935 318 ntBASIC14.26□□□□□ -0.13
Usp5P56399 Gm45433-201ENSMUST00000209386 247 ntBASIC14.26□□□□□ -0.13
Usp5P56399 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC14.26□□□□□ -0.13
Usp5P56399 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp5P56399 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Usp5P56399 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp5P56399 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Usp5P56399 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp5P56399 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp5P56399 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp5P56399 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Usp5P56399 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp5P56399 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp5P56399 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp5P56399 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Usp5P56399 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp5P56399 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
Usp5P56399 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC14.26□□□□□ -0.13
Usp5P56399 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp5P56399 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp5P56399 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp5P56399 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp5P56399 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp5P56399 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp5P56399 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Usp5P56399 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp5P56399 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp5P56399 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Usp5P56399 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp5P56399 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Usp5P56399 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC14.25□□□□□ -0.13
Usp5P56399 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Usp5P56399 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Usp5P56399 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC14.25□□□□□ -0.13
Usp5P56399 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp5P56399 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 103.3 ms