Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Sox3P53784 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox3P53784 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox3P53784 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox3P53784 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox3P53784 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox3P53784 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox3P53784 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox3P53784 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox3P53784 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox3P53784 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox3P53784 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Sox3P53784 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox3P53784 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Sox3P53784 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.76□□□□□ -0.53
Sox3P53784 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.76□□□□□ -0.53
Sox3P53784 Gm12266-201ENSMUST00000120311 962 ntBASIC11.76□□□□□ -0.53
Sox3P53784 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.76□□□□□ -0.53
Sox3P53784 Gm17208-201ENSMUST00000168388 535 ntBASIC11.76□□□□□ -0.53
Sox3P53784 Gm7003-201ENSMUST00000195089 312 ntBASIC11.76□□□□□ -0.53
Sox3P53784 Gm18893-201ENSMUST00000198416 943 ntBASIC11.76□□□□□ -0.53
Sox3P53784 Gm19931-201ENSMUST00000198920 368 ntBASIC11.76□□□□□ -0.53
Sox3P53784 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.76□□□□□ -0.53
Sox3P53784 Gm8913-201ENSMUST00000209491 641 ntBASIC11.76□□□□□ -0.53
Sox3P53784 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.76□□□□□ -0.53
Sox3P53784 Gm8712-201ENSMUST00000221090 701 ntBASIC11.76□□□□□ -0.53
Sox3P53784 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Sox3P53784 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.76□□□□□ -0.53
Sox3P53784 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Sox3P53784 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox3P53784 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox3P53784 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox3P53784 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox3P53784 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox3P53784 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox3P53784 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.76□□□□□ -0.53
Sox3P53784 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox3P53784 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox3P53784 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox3P53784 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox3P53784 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox3P53784 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox3P53784 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox3P53784 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox3P53784 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox3P53784 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox3P53784 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Sox3P53784 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox3P53784 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Sox3P53784 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox3P53784 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox3P53784 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox3P53784 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox3P53784 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox3P53784 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Sox3P53784 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox3P53784 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox3P53784 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Sox3P53784 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.76□□□□□ -0.53
Sox3P53784 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox3P53784 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox3P53784 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox3P53784 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sox3P53784 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox3P53784 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox3P53784 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox3P53784 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox3P53784 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.75□□□□□ -0.53
Sox3P53784 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.75□□□□□ -0.53
Sox3P53784 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox3P53784 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox3P53784 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox3P53784 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox3P53784 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Sox3P53784 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox3P53784 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Sox3P53784 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Sox3P53784 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sox3P53784 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Sox3P53784 Gm18734-201ENSMUST00000172937 808 ntBASIC11.75□□□□□ -0.53
Sox3P53784 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.75□□□□□ -0.53
Sox3P53784 Gm9555-201ENSMUST00000200908 583 ntBASIC11.75□□□□□ -0.53
Sox3P53784 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox3P53784 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox3P53784 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox3P53784 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Sox3P53784 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sox3P53784 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Sox3P53784 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Sox3P53784 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sox3P53784 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sox3P53784 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.75□□□□□ -0.53
Sox3P53784 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Sox3P53784 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox3P53784 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Sox3P53784 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sox3P53784 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox3P53784 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox3P53784 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox3P53784 Gm44999-201ENSMUST00000207456 1493 ntBASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms