Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Thbs1P35441 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Thbs1P35441 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Thbs1P35441 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thbs1P35441 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thbs1P35441 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.38□□□□□ -0.59
Thbs1P35441 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thbs1P35441 Gm29644-201ENSMUST00000189003 1341 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Thbs1P35441 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thbs1P35441 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.38□□□□□ -0.59
Thbs1P35441 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Thbs1P35441 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thbs1P35441 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thbs1P35441 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thbs1P35441 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thbs1P35441 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thbs1P35441 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thbs1P35441 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Thbs1P35441 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Thbs1P35441 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thbs1P35441 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thbs1P35441 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thbs1P35441 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thbs1P35441 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thbs1P35441 Gm24830-201ENSMUST00000102024 166 ntBASIC11.38□□□□□ -0.59
Thbs1P35441 Gm22018-201ENSMUST00000104357 131 ntBASIC11.38□□□□□ -0.59
Thbs1P35441 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thbs1P35441 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.38□□□□□ -0.59
Thbs1P35441 Gm14999-201ENSMUST00000121039 624 ntBASIC11.38□□□□□ -0.59
Thbs1P35441 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.38□□□□□ -0.59
Thbs1P35441 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.38□□□□□ -0.59
Thbs1P35441 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Thbs1P35441 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.38□□□□□ -0.59
Thbs1P35441 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.38□□□□□ -0.59
Thbs1P35441 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.38□□□□□ -0.59
Thbs1P35441 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.38□□□□□ -0.59
Thbs1P35441 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.38□□□□□ -0.59
Thbs1P35441 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Thbs1P35441 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.38□□□□□ -0.59
Thbs1P35441 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.38□□□□□ -0.59
Thbs1P35441 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.38□□□□□ -0.59
Thbs1P35441 Gm18377-201ENSMUST00000215141 607 ntBASIC11.38□□□□□ -0.59
Thbs1P35441 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thbs1P35441 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Thbs1P35441 Gm26232-201ENSMUST00000083360 166 ntBASIC11.38□□□□□ -0.59
Thbs1P35441 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.38□□□□□ -0.59
Thbs1P35441 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Thbs1P35441 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Thbs1P35441 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thbs1P35441 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.38□□□□□ -0.59
Thbs1P35441 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thbs1P35441 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thbs1P35441 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.38□□□□□ -0.59
Thbs1P35441 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thbs1P35441 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.38□□□□□ -0.59
Thbs1P35441 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thbs1P35441 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thbs1P35441 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Thbs1P35441 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thbs1P35441 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thbs1P35441 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Thbs1P35441 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thbs1P35441 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thbs1P35441 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thbs1P35441 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thbs1P35441 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.38□□□□□ -0.59
Thbs1P35441 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thbs1P35441 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thbs1P35441 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thbs1P35441 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Thbs1P35441 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Thbs1P35441 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Thbs1P35441 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Thbs1P35441 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Thbs1P35441 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Thbs1P35441 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Thbs1P35441 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Thbs1P35441 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Thbs1P35441 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Thbs1P35441 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Thbs1P35441 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Thbs1P35441 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.37□□□□□ -0.59
Thbs1P35441 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Thbs1P35441 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Thbs1P35441 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Thbs1P35441 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Thbs1P35441 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Thbs1P35441 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.37□□□□□ -0.59
Thbs1P35441 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Thbs1P35441 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Thbs1P35441 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.37□□□□□ -0.59
Thbs1P35441 Gm10434-201ENSMUST00000101158 471 ntBASIC11.37□□□□□ -0.59
Thbs1P35441 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Thbs1P35441 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Thbs1P35441 Gm6023-201ENSMUST00000118217 606 ntBASIC11.37□□□□□ -0.59
Thbs1P35441 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.37□□□□□ -0.59
Thbs1P35441 Gm13316-201ENSMUST00000140537 691 ntBASIC11.37□□□□□ -0.59
Thbs1P35441 Gm13570-201ENSMUST00000140763 309 ntBASIC11.37□□□□□ -0.59
Thbs1P35441 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Thbs1P35441 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms