Protein–RNA interactions for Protein: P19426

Nelfe, Negative elongation factor E, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NelfeP19426 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.84□□□□□ -0.51
NelfeP19426 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.84□□□□□ -0.51
NelfeP19426 Gm25732-201ENSMUST00000175168 60 ntBASIC11.84□□□□□ -0.51
NelfeP19426 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC11.84□□□□□ -0.51
NelfeP19426 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
NelfeP19426 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.84□□□□□ -0.51
NelfeP19426 Gm18753-201ENSMUST00000201000 566 ntBASIC11.84□□□□□ -0.51
NelfeP19426 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.84□□□□□ -0.51
NelfeP19426 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NelfeP19426 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NelfeP19426 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NelfeP19426 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NelfeP19426 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
NelfeP19426 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NelfeP19426 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NelfeP19426 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NelfeP19426 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
NelfeP19426 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
NelfeP19426 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
NelfeP19426 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
NelfeP19426 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
NelfeP19426 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
NelfeP19426 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
NelfeP19426 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
NelfeP19426 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NelfeP19426 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NelfeP19426 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NelfeP19426 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
NelfeP19426 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NelfeP19426 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
NelfeP19426 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NelfeP19426 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NelfeP19426 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC11.83□□□□□ -0.52
NelfeP19426 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.83□□□□□ -0.52
NelfeP19426 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
NelfeP19426 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NelfeP19426 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
NelfeP19426 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NelfeP19426 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.83□□□□□ -0.52
NelfeP19426 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NelfeP19426 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.83□□□□□ -0.52
NelfeP19426 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.83□□□□□ -0.52
NelfeP19426 Mir5120-201ENSMUST00000175020 78 ntBASIC11.83□□□□□ -0.52
NelfeP19426 Gm18730-201ENSMUST00000218038 343 ntBASIC11.83□□□□□ -0.52
NelfeP19426 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
NelfeP19426 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NelfeP19426 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NelfeP19426 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.83□□□□□ -0.52
NelfeP19426 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
NelfeP19426 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
NelfeP19426 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
NelfeP19426 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
NelfeP19426 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
NelfeP19426 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
NelfeP19426 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NelfeP19426 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
NelfeP19426 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NelfeP19426 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.83□□□□□ -0.52
NelfeP19426 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.83□□□□□ -0.52
NelfeP19426 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
NelfeP19426 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NelfeP19426 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NelfeP19426 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NelfeP19426 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NelfeP19426 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
NelfeP19426 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
NelfeP19426 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NelfeP19426 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.82□□□□□ -0.52
NelfeP19426 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NelfeP19426 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
NelfeP19426 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
NelfeP19426 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NelfeP19426 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.82□□□□□ -0.52
NelfeP19426 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NelfeP19426 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
NelfeP19426 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.82□□□□□ -0.52
NelfeP19426 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NelfeP19426 Gm12380-201ENSMUST00000119012 544 ntBASIC11.82□□□□□ -0.52
NelfeP19426 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NelfeP19426 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
NelfeP19426 B9d1os-201ENSMUST00000137010 674 ntBASIC11.82□□□□□ -0.52
NelfeP19426 Gm5616-201ENSMUST00000165252 384 ntBASIC11.82□□□□□ -0.52
NelfeP19426 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NelfeP19426 Gm8741-201ENSMUST00000174736 384 ntBASIC11.82□□□□□ -0.52
NelfeP19426 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.82□□□□□ -0.52
NelfeP19426 Gm43138-201ENSMUST00000199123 708 ntBASIC11.82□□□□□ -0.52
NelfeP19426 AY036118-201ENSMUST00000200021 923 ntBASIC11.82□□□□□ -0.52
NelfeP19426 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NelfeP19426 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NelfeP19426 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.82□□□□□ -0.52
NelfeP19426 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
NelfeP19426 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NelfeP19426 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.82□□□□□ -0.52
NelfeP19426 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NelfeP19426 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NelfeP19426 Gm9333-201ENSMUST00000205452 1323 ntBASIC11.82□□□□□ -0.52
NelfeP19426 Gm43289-201ENSMUST00000200537 1475 ntBASIC11.82□□□□□ -0.52
NelfeP19426 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NelfeP19426 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
NelfeP19426 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms