Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Gm10312-201ENSMUST00000078515 489 ntBASIC12.34□□□□□ -0.43
Hoxb3P09026 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Hoxb3P09026 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxb3P09026 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxb3P09026 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Hoxb3P09026 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxb3P09026 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxb3P09026 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Hoxb3P09026 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.34□□□□□ -0.43
Hoxb3P09026 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxb3P09026 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxb3P09026 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxb3P09026 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Hoxb3P09026 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxb3P09026 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxb3P09026 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Hoxb3P09026 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxb3P09026 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxb3P09026 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxb3P09026 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.43
Hoxb3P09026 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Hoxb3P09026 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxb3P09026 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Hoxb3P09026 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxb3P09026 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxb3P09026 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxb3P09026 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxb3P09026 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxb3P09026 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxb3P09026 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxb3P09026 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxb3P09026 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Hoxb3P09026 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.33□□□□□ -0.44
Hoxb3P09026 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxb3P09026 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Hoxb3P09026 Gm14234-201ENSMUST00000119539 845 ntBASIC12.33□□□□□ -0.44
Hoxb3P09026 Gm12990-201ENSMUST00000120372 468 ntBASIC12.33□□□□□ -0.44
Hoxb3P09026 Gm7722-201ENSMUST00000120646 741 ntBASIC12.33□□□□□ -0.44
Hoxb3P09026 Gm26368-201ENSMUST00000157826 118 ntBASIC12.33□□□□□ -0.44
Hoxb3P09026 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxb3P09026 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.33□□□□□ -0.44
Hoxb3P09026 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.33□□□□□ -0.44
Hoxb3P09026 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxb3P09026 Gm28882-201ENSMUST00000185504 314 ntBASIC12.33□□□□□ -0.44
Hoxb3P09026 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxb3P09026 Gm29304-201ENSMUST00000186555 695 ntBASIC12.33□□□□□ -0.44
Hoxb3P09026 Gm29223-201ENSMUST00000188867 695 ntBASIC12.33□□□□□ -0.44
Hoxb3P09026 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.33□□□□□ -0.44
Hoxb3P09026 Gm37921-201ENSMUST00000194333 695 ntBASIC12.33□□□□□ -0.44
Hoxb3P09026 Gm44651-201ENSMUST00000207343 372 ntBASIC12.33□□□□□ -0.44
Hoxb3P09026 AC132104.1-201ENSMUST00000213615 260 ntBASIC12.33□□□□□ -0.44
Hoxb3P09026 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC12.33□□□□□ -0.44
Hoxb3P09026 AC166341.2-201ENSMUST00000220571 120 ntBASIC12.33□□□□□ -0.44
Hoxb3P09026 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.33□□□□□ -0.44
Hoxb3P09026 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxb3P09026 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxb3P09026 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Hoxb3P09026 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC12.33□□□□□ -0.44
Hoxb3P09026 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxb3P09026 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Hoxb3P09026 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.33□□□□□ -0.44
Hoxb3P09026 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxb3P09026 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxb3P09026 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxb3P09026 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxb3P09026 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxb3P09026 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Hoxb3P09026 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Hoxb3P09026 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxb3P09026 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxb3P09026 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Hoxb3P09026 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxb3P09026 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxb3P09026 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.32□□□□□ -0.44
Hoxb3P09026 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxb3P09026 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxb3P09026 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxb3P09026 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Hoxb3P09026 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.32□□□□□ -0.44
Hoxb3P09026 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Hoxb3P09026 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxb3P09026 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxb3P09026 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.32□□□□□ -0.44
Hoxb3P09026 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxb3P09026 Gm12314-201ENSMUST00000118104 538 ntBASIC12.32□□□□□ -0.44
Hoxb3P09026 Gm14219-201ENSMUST00000120414 288 ntBASIC12.32□□□□□ -0.44
Hoxb3P09026 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxb3P09026 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.32□□□□□ -0.44
Hoxb3P09026 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC12.32□□□□□ -0.44
Hoxb3P09026 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxb3P09026 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxb3P09026 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxb3P09026 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxb3P09026 Gm37469-201ENSMUST00000193728 890 ntBASIC12.32□□□□□ -0.44
Hoxb3P09026 Gm42518-201ENSMUST00000196277 938 ntBASIC12.32□□□□□ -0.44
Hoxb3P09026 Gm43854-201ENSMUST00000200418 394 ntBASIC12.32□□□□□ -0.44
Hoxb3P09026 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC12.32□□□□□ -0.44
Hoxb3P09026 Gm45276-201ENSMUST00000209549 1086 ntBASIC12.32□□□□□ -0.44
Hoxb3P09026 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Hoxb3P09026 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms