Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ptch2O35595 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Ptch2O35595 Gm9211-201ENSMUST00000182882 975 ntBASIC12.57□□□□□ -0.4
Ptch2O35595 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.57□□□□□ -0.4
Ptch2O35595 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC12.57□□□□□ -0.4
Ptch2O35595 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.57□□□□□ -0.4
Ptch2O35595 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ptch2O35595 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ptch2O35595 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Ptch2O35595 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ptch2O35595 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ptch2O35595 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ptch2O35595 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ptch2O35595 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ptch2O35595 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Ptch2O35595 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ptch2O35595 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ptch2O35595 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ptch2O35595 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ptch2O35595 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ptch2O35595 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ptch2O35595 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ptch2O35595 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Ptch2O35595 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ptch2O35595 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ptch2O35595 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.56□□□□□ -0.4
Ptch2O35595 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ptch2O35595 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ptch2O35595 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ptch2O35595 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ptch2O35595 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ptch2O35595 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ptch2O35595 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ptch2O35595 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ptch2O35595 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ptch2O35595 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ptch2O35595 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ptch2O35595 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ptch2O35595 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Ptch2O35595 Gm14760-201ENSMUST00000121831 999 ntBASIC12.56□□□□□ -0.4
Ptch2O35595 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Ptch2O35595 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC12.56□□□□□ -0.4
Ptch2O35595 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ptch2O35595 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ptch2O35595 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.56□□□□□ -0.4
Ptch2O35595 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.56□□□□□ -0.4
Ptch2O35595 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.56□□□□□ -0.4
Ptch2O35595 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC12.56□□□□□ -0.4
Ptch2O35595 Gm44958-201ENSMUST00000203734 736 ntBASIC12.56□□□□□ -0.4
Ptch2O35595 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.56□□□□□ -0.4
Ptch2O35595 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.56□□□□□ -0.4
Ptch2O35595 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Ptch2O35595 AC154680.1-201ENSMUST00000224376 859 ntBASIC12.56□□□□□ -0.4
Ptch2O35595 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12.56□□□□□ -0.4
Ptch2O35595 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ptch2O35595 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.56□□□□□ -0.4
Ptch2O35595 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ptch2O35595 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ptch2O35595 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ptch2O35595 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ptch2O35595 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ptch2O35595 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ptch2O35595 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ptch2O35595 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ptch2O35595 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.4
Ptch2O35595 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Ptch2O35595 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.56□□□□□ -0.4
Ptch2O35595 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ptch2O35595 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Ptch2O35595 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ptch2O35595 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ptch2O35595 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ptch2O35595 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ptch2O35595 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Ptch2O35595 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ptch2O35595 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ptch2O35595 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ptch2O35595 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ptch2O35595 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ptch2O35595 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ptch2O35595 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.55□□□□□ -0.4
Ptch2O35595 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ptch2O35595 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ptch2O35595 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ptch2O35595 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.55□□□□□ -0.4
Ptch2O35595 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.55□□□□□ -0.4
Ptch2O35595 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ptch2O35595 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ptch2O35595 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ptch2O35595 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.55□□□□□ -0.4
Ptch2O35595 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.55□□□□□ -0.4
Ptch2O35595 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ptch2O35595 Gm9062-201ENSMUST00000117712 727 ntBASIC12.55□□□□□ -0.4
Ptch2O35595 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ptch2O35595 Gm19353-201ENSMUST00000184561 445 ntBASIC12.55□□□□□ -0.4
Ptch2O35595 Gm43962-201ENSMUST00000203898 190 ntBASIC12.55□□□□□ -0.4
Ptch2O35595 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ptch2O35595 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ptch2O35595 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ptch2O35595 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms