Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pcdh1F7BJK1 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pcdh1F7BJK1 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pcdh1F7BJK1 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pcdh1F7BJK1 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.02□□□□□ -0.64
Pcdh1F7BJK1 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pcdh1F7BJK1 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pcdh1F7BJK1 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pcdh1F7BJK1 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pcdh1F7BJK1 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pcdh1F7BJK1 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Pcdh1F7BJK1 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Pcdh1F7BJK1 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pcdh1F7BJK1 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh1F7BJK1 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh1F7BJK1 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.02□□□□□ -0.65
Pcdh1F7BJK1 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh1F7BJK1 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.02□□□□□ -0.65
Pcdh1F7BJK1 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh1F7BJK1 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.02□□□□□ -0.65
Pcdh1F7BJK1 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.02□□□□□ -0.65
Pcdh1F7BJK1 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Pcdh1F7BJK1 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh1F7BJK1 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh1F7BJK1 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh1F7BJK1 Gm13315-201ENSMUST00000120376 991 ntBASIC11.02□□□□□ -0.65
Pcdh1F7BJK1 Gm12138-201ENSMUST00000122180 951 ntBASIC11.02□□□□□ -0.65
Pcdh1F7BJK1 Gm7029-201ENSMUST00000173226 450 ntBASIC11.02□□□□□ -0.65
Pcdh1F7BJK1 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
Pcdh1F7BJK1 Gm27486-201ENSMUST00000184923 80 ntBASIC11.02□□□□□ -0.65
Pcdh1F7BJK1 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.02□□□□□ -0.65
Pcdh1F7BJK1 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh1F7BJK1 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh1F7BJK1 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.02□□□□□ -0.65
Pcdh1F7BJK1 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.02□□□□□ -0.65
Pcdh1F7BJK1 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh1F7BJK1 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh1F7BJK1 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh1F7BJK1 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh1F7BJK1 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh1F7BJK1 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh1F7BJK1 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh1F7BJK1 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Pcdh1F7BJK1 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Pcdh1F7BJK1 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Pcdh1F7BJK1 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh1F7BJK1 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.02□□□□□ -0.65
Pcdh1F7BJK1 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh1F7BJK1 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 Gm11814-201ENSMUST00000119515 929 ntBASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 Gm13492-201ENSMUST00000119772 665 ntBASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 Gm9083-201ENSMUST00000120423 819 ntBASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms