Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
H2afb1Q9CQ70 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
H2afb1Q9CQ70 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
H2afb1Q9CQ70 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H2afb1Q9CQ70 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
H2afb1Q9CQ70 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H2afb1Q9CQ70 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.05□□□□□ -0.8
H2afb1Q9CQ70 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC10.05□□□□□ -0.8
H2afb1Q9CQ70 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.05□□□□□ -0.8
H2afb1Q9CQ70 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
H2afb1Q9CQ70 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
H2afb1Q9CQ70 Gm2606-201ENSMUST00000100754 1002 ntBASIC10.05□□□□□ -0.8
H2afb1Q9CQ70 Gm12286-201ENSMUST00000119246 1002 ntBASIC10.05□□□□□ -0.8
H2afb1Q9CQ70 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
H2afb1Q9CQ70 Gm25261-201ENSMUST00000157416 134 ntBASIC10.05□□□□□ -0.8
H2afb1Q9CQ70 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC10.05□□□□□ -0.8
H2afb1Q9CQ70 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC10.05□□□□□ -0.8
H2afb1Q9CQ70 Gm8835-201ENSMUST00000173096 1169 ntBASIC10.05□□□□□ -0.8
H2afb1Q9CQ70 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.05□□□□□ -0.8
H2afb1Q9CQ70 Gm8602-201ENSMUST00000184045 607 ntBASIC10.05□□□□□ -0.8
H2afb1Q9CQ70 Gm27731-201ENSMUST00000185192 107 ntBASIC10.05□□□□□ -0.8
H2afb1Q9CQ70 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
H2afb1Q9CQ70 Gm6266-201ENSMUST00000203844 806 ntBASIC10.05□□□□□ -0.8
H2afb1Q9CQ70 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC10.05□□□□□ -0.8
H2afb1Q9CQ70 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H2afb1Q9CQ70 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H2afb1Q9CQ70 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H2afb1Q9CQ70 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
H2afb1Q9CQ70 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
H2afb1Q9CQ70 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H2afb1Q9CQ70 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC10.05□□□□□ -0.8
H2afb1Q9CQ70 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H2afb1Q9CQ70 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
H2afb1Q9CQ70 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H2afb1Q9CQ70 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H2afb1Q9CQ70 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H2afb1Q9CQ70 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
H2afb1Q9CQ70 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
H2afb1Q9CQ70 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H2afb1Q9CQ70 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H2afb1Q9CQ70 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
H2afb1Q9CQ70 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
H2afb1Q9CQ70 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H2afb1Q9CQ70 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H2afb1Q9CQ70 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
H2afb1Q9CQ70 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.05□□□□□ -0.8
H2afb1Q9CQ70 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC10.05□□□□□ -0.8
H2afb1Q9CQ70 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H2afb1Q9CQ70 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 AC154404.1-201ENSMUST00000223601 2077 ntBASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 Gm24830-201ENSMUST00000102024 166 ntBASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 Gm12058-201ENSMUST00000118614 437 ntBASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 AC140375.2-201ENSMUST00000225283 584 ntBASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 AC126253.1-201ENSMUST00000227974 824 ntBASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 Gm26232-201ENSMUST00000083360 166 ntBASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 Rnu1b6-201ENSMUST00000083839 166 ntBASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
H2afb1Q9CQ70 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms