Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 AC125486.1-201ENSMUST00000218701 320 ntBASIC10.79□□□□□ -0.68
Scrt1Q99M85 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Gm5989-201ENSMUST00000096092 2077 ntBASIC10.79□□□□□ -0.68
Scrt1Q99M85 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
Scrt1Q99M85 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Gm15459-201ENSMUST00000117405 1941 ntBASIC10.79□□□□□ -0.68
Scrt1Q99M85 Gm8355-201ENSMUST00000177767 1941 ntBASIC10.79□□□□□ -0.68
Scrt1Q99M85 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.79□□□□□ -0.68
Scrt1Q99M85 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scrt1Q99M85 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scrt1Q99M85 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Scrt1Q99M85 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scrt1Q99M85 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Scrt1Q99M85 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scrt1Q99M85 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Scrt1Q99M85 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scrt1Q99M85 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Scrt1Q99M85 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scrt1Q99M85 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scrt1Q99M85 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scrt1Q99M85 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC10.78□□□□□ -0.68
Scrt1Q99M85 Gm15711-201ENSMUST00000118889 535 ntBASIC10.78□□□□□ -0.68
Scrt1Q99M85 Gm14999-201ENSMUST00000121039 624 ntBASIC10.78□□□□□ -0.68
Scrt1Q99M85 Gm16397-201ENSMUST00000122201 494 ntBASIC10.78□□□□□ -0.68
Scrt1Q99M85 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC10.78□□□□□ -0.68
Scrt1Q99M85 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC10.78□□□□□ -0.68
Scrt1Q99M85 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Scrt1Q99M85 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC10.78□□□□□ -0.68
Scrt1Q99M85 Mir6958-201ENSMUST00000184207 73 ntBASIC10.78□□□□□ -0.68
Scrt1Q99M85 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC10.78□□□□□ -0.68
Scrt1Q99M85 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC10.78□□□□□ -0.68
Scrt1Q99M85 Gm43058-201ENSMUST00000197645 625 ntBASIC10.78□□□□□ -0.68
Scrt1Q99M85 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scrt1Q99M85 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Scrt1Q99M85 Gm10752-201ENSMUST00000218348 729 ntBASIC10.78□□□□□ -0.68
Scrt1Q99M85 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC10.78□□□□□ -0.68
Scrt1Q99M85 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scrt1Q99M85 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Scrt1Q99M85 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scrt1Q99M85 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Scrt1Q99M85 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scrt1Q99M85 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scrt1Q99M85 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scrt1Q99M85 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scrt1Q99M85 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scrt1Q99M85 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC10.78□□□□□ -0.68
Scrt1Q99M85 Gm42863-201ENSMUST00000197875 2958 ntBASIC10.78□□□□□ -0.68
Scrt1Q99M85 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scrt1Q99M85 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scrt1Q99M85 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Scrt1Q99M85 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scrt1Q99M85 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Scrt1Q99M85 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Scrt1Q99M85 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Scrt1Q99M85 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Scrt1Q99M85 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC10.78□□□□□ -0.68
Scrt1Q99M85 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Scrt1Q99M85 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Scrt1Q99M85 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Scrt1Q99M85 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Scrt1Q99M85 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Scrt1Q99M85 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.68
Scrt1Q99M85 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Scrt1Q99M85 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Scrt1Q99M85 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Scrt1Q99M85 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Scrt1Q99M85 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Scrt1Q99M85 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Scrt1Q99M85 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Scrt1Q99M85 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Scrt1Q99M85 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Scrt1Q99M85 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Scrt1Q99M85 Gm5466-201ENSMUST00000119395 1890 ntBASIC10.77□□□□□ -0.69
Scrt1Q99M85 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Scrt1Q99M85 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Scrt1Q99M85 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Scrt1Q99M85 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC10.77□□□□□ -0.69
Scrt1Q99M85 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms