Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clp1Q99LI9 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.92□□□□□ -0.34
Clp1Q99LI9 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Clp1Q99LI9 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.92□□□□□ -0.34
Clp1Q99LI9 Gm22920-201ENSMUST00000102175 109 ntBASIC12.92□□□□□ -0.34
Clp1Q99LI9 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clp1Q99LI9 Gm11660-201ENSMUST00000120955 412 ntBASIC12.92□□□□□ -0.34
Clp1Q99LI9 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Clp1Q99LI9 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.92□□□□□ -0.34
Clp1Q99LI9 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.92□□□□□ -0.34
Clp1Q99LI9 Gm21092-201ENSMUST00000178995 955 ntBASIC12.92□□□□□ -0.34
Clp1Q99LI9 Gm21156-201ENSMUST00000189693 869 ntBASIC12.92□□□□□ -0.34
Clp1Q99LI9 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC12.92□□□□□ -0.34
Clp1Q99LI9 Gm42518-201ENSMUST00000196277 938 ntBASIC12.92□□□□□ -0.34
Clp1Q99LI9 Gm43186-201ENSMUST00000198130 824 ntBASIC12.92□□□□□ -0.34
Clp1Q99LI9 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clp1Q99LI9 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Clp1Q99LI9 Gm3028-201ENSMUST00000213805 1119 ntBASIC12.92□□□□□ -0.34
Clp1Q99LI9 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.92□□□□□ -0.34
Clp1Q99LI9 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.92□□□□□ -0.34
Clp1Q99LI9 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.92□□□□□ -0.34
Clp1Q99LI9 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clp1Q99LI9 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Clp1Q99LI9 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clp1Q99LI9 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clp1Q99LI9 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clp1Q99LI9 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clp1Q99LI9 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.92□□□□□ -0.34
Clp1Q99LI9 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.92□□□□□ -0.34
Clp1Q99LI9 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clp1Q99LI9 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Clp1Q99LI9 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clp1Q99LI9 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Clp1Q99LI9 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.92□□□□□ -0.34
Clp1Q99LI9 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.91□□□□□ -0.34
Clp1Q99LI9 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clp1Q99LI9 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Clp1Q99LI9 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.91□□□□□ -0.34
Clp1Q99LI9 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.91□□□□□ -0.34
Clp1Q99LI9 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.91□□□□□ -0.34
Clp1Q99LI9 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clp1Q99LI9 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clp1Q99LI9 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clp1Q99LI9 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clp1Q99LI9 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Clp1Q99LI9 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Clp1Q99LI9 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clp1Q99LI9 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.91□□□□□ -0.34
Clp1Q99LI9 Gm12579-201ENSMUST00000118040 783 ntBASIC12.91□□□□□ -0.34
Clp1Q99LI9 Gm8731-201ENSMUST00000118088 412 ntBASIC12.91□□□□□ -0.34
Clp1Q99LI9 Gm1848-201ENSMUST00000120711 789 ntBASIC12.91□□□□□ -0.34
Clp1Q99LI9 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Clp1Q99LI9 Gm18893-201ENSMUST00000198416 943 ntBASIC12.91□□□□□ -0.34
Clp1Q99LI9 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.91□□□□□ -0.34
Clp1Q99LI9 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clp1Q99LI9 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clp1Q99LI9 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.91□□□□□ -0.34
Clp1Q99LI9 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Clp1Q99LI9 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clp1Q99LI9 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clp1Q99LI9 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clp1Q99LI9 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Clp1Q99LI9 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clp1Q99LI9 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Clp1Q99LI9 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clp1Q99LI9 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Clp1Q99LI9 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clp1Q99LI9 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Clp1Q99LI9 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.91□□□□□ -0.34
Clp1Q99LI9 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clp1Q99LI9 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.91□□□□□ -0.34
Clp1Q99LI9 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clp1Q99LI9 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clp1Q99LI9 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Clp1Q99LI9 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clp1Q99LI9 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Clp1Q99LI9 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.9□□□□□ -0.34
Clp1Q99LI9 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.9□□□□□ -0.34
Clp1Q99LI9 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clp1Q99LI9 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Clp1Q99LI9 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.9□□□□□ -0.34
Clp1Q99LI9 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clp1Q99LI9 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Clp1Q99LI9 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC12.9□□□□□ -0.34
Clp1Q99LI9 Gm22711-201ENSMUST00000116890 133 ntBASIC12.9□□□□□ -0.34
Clp1Q99LI9 Gm13916-201ENSMUST00000117368 628 ntBASIC12.9□□□□□ -0.34
Clp1Q99LI9 Gm15004-201ENSMUST00000119192 630 ntBASIC12.9□□□□□ -0.34
Clp1Q99LI9 Gm5419-201ENSMUST00000119301 527 ntBASIC12.9□□□□□ -0.34
Clp1Q99LI9 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.9□□□□□ -0.34
Clp1Q99LI9 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clp1Q99LI9 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Clp1Q99LI9 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.9□□□□□ -0.34
Clp1Q99LI9 Gm22442-201ENSMUST00000157256 144 ntBASIC12.9□□□□□ -0.34
Clp1Q99LI9 Gm6485-201ENSMUST00000160676 439 ntBASIC12.9□□□□□ -0.34
Clp1Q99LI9 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.9□□□□□ -0.34
Clp1Q99LI9 Gm9645-201ENSMUST00000197131 792 ntBASIC12.9□□□□□ -0.34
Clp1Q99LI9 Gm5714-201ENSMUST00000197343 566 ntBASIC12.9□□□□□ -0.34
Clp1Q99LI9 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Clp1Q99LI9 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC12.9□□□□□ -0.34
Clp1Q99LI9 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms