Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Gm13045-201ENSMUST00000119019 712 ntBASIC12.27□□□□□ -0.45
Pcdhga6Q91XY2 Gm13736-201ENSMUST00000119272 253 ntBASIC12.27□□□□□ -0.45
Pcdhga6Q91XY2 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.27□□□□□ -0.45
Pcdhga6Q91XY2 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.27□□□□□ -0.45
Pcdhga6Q91XY2 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.27□□□□□ -0.45
Pcdhga6Q91XY2 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhga6Q91XY2 Gm19353-201ENSMUST00000184561 445 ntBASIC12.27□□□□□ -0.45
Pcdhga6Q91XY2 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.27□□□□□ -0.45
Pcdhga6Q91XY2 Gm43916-201ENSMUST00000205062 967 ntBASIC12.27□□□□□ -0.45
Pcdhga6Q91XY2 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.27□□□□□ -0.45
Pcdhga6Q91XY2 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhga6Q91XY2 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhga6Q91XY2 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhga6Q91XY2 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhga6Q91XY2 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhga6Q91XY2 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhga6Q91XY2 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Pcdhga6Q91XY2 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhga6Q91XY2 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhga6Q91XY2 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Pcdhga6Q91XY2 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhga6Q91XY2 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhga6Q91XY2 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhga6Q91XY2 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC12.27□□□□□ -0.45
Pcdhga6Q91XY2 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhga6Q91XY2 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhga6Q91XY2 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC12.27□□□□□ -0.45
Pcdhga6Q91XY2 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhga6Q91XY2 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhga6Q91XY2 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Pcdhga6Q91XY2 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.27□□□□□ -0.45
Pcdhga6Q91XY2 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhga6Q91XY2 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.27□□□□□ -0.45
Pcdhga6Q91XY2 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Pcdhga6Q91XY2 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhga6Q91XY2 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 Gm12015-201ENSMUST00000117065 843 ntBASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 Gm12795-201ENSMUST00000117594 539 ntBASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 Gm29155-201ENSMUST00000185910 269 ntBASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 Gm37666-201ENSMUST00000194110 866 ntBASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 Gm19187-201ENSMUST00000206781 892 ntBASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga6Q91XY2 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga6Q91XY2 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga6Q91XY2 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga6Q91XY2 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga6Q91XY2 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga6Q91XY2 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.25□□□□□ -0.45
Pcdhga6Q91XY2 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga6Q91XY2 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga6Q91XY2 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga6Q91XY2 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga6Q91XY2 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.25□□□□□ -0.45
Pcdhga6Q91XY2 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Pcdhga6Q91XY2 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Pcdhga6Q91XY2 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga6Q91XY2 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms