Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx41Q91VN6 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx41Q91VN6 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx41Q91VN6 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ddx41Q91VN6 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Ddx41Q91VN6 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC14.12□□□□□ -0.15
Ddx41Q91VN6 Gm24990-201ENSMUST00000157406 323 ntBASIC14.12□□□□□ -0.15
Ddx41Q91VN6 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx41Q91VN6 AC161537.1-201ENSMUST00000226199 1015 ntBASIC14.12□□□□□ -0.15
Ddx41Q91VN6 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx41Q91VN6 Gm43823-201ENSMUST00000197391 1808 ntBASIC14.12□□□□□ -0.15
Ddx41Q91VN6 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx41Q91VN6 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx41Q91VN6 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx41Q91VN6 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx41Q91VN6 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC14.12□□□□□ -0.15
Ddx41Q91VN6 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx41Q91VN6 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx41Q91VN6 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx41Q91VN6 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx41Q91VN6 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC14.12□□□□□ -0.15
Ddx41Q91VN6 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.12□□□□□ -0.15
Ddx41Q91VN6 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx41Q91VN6 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ddx41Q91VN6 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.12□□□□□ -0.15
Ddx41Q91VN6 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx41Q91VN6 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx41Q91VN6 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ddx41Q91VN6 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx41Q91VN6 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx41Q91VN6 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx41Q91VN6 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx41Q91VN6 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx41Q91VN6 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.11□□□□□ -0.15
Ddx41Q91VN6 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ddx41Q91VN6 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx41Q91VN6 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx41Q91VN6 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC14.11□□□□□ -0.15
Ddx41Q91VN6 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx41Q91VN6 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx41Q91VN6 Gm4760-201ENSMUST00000119663 1030 ntBASIC14.11□□□□□ -0.15
Ddx41Q91VN6 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC14.11□□□□□ -0.15
Ddx41Q91VN6 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx41Q91VN6 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC14.11□□□□□ -0.15
Ddx41Q91VN6 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC14.11□□□□□ -0.15
Ddx41Q91VN6 Mir5132-201ENSMUST00000175166 71 ntBASIC14.11□□□□□ -0.15
Ddx41Q91VN6 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC14.11□□□□□ -0.15
Ddx41Q91VN6 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx41Q91VN6 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx41Q91VN6 Gm2260-201ENSMUST00000184965 657 ntBASIC14.11□□□□□ -0.15
Ddx41Q91VN6 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx41Q91VN6 Gm37849-201ENSMUST00000194722 1881 ntBASIC14.11□□□□□ -0.15
Ddx41Q91VN6 AC138604.1-201ENSMUST00000226969 739 ntBASIC14.11□□□□□ -0.15
Ddx41Q91VN6 Gm15991-202ENSMUST00000212123 3565 ntBASIC14.11□□□□□ -0.15
Ddx41Q91VN6 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC14.11□□□□□ -0.15
Ddx41Q91VN6 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx41Q91VN6 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx41Q91VN6 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx41Q91VN6 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx41Q91VN6 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC14.11□□□□□ -0.15
Ddx41Q91VN6 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC14.11□□□□□ -0.15
Ddx41Q91VN6 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx41Q91VN6 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx41Q91VN6 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC14.11□□□□□ -0.15
Ddx41Q91VN6 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Ddx41Q91VN6 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx41Q91VN6 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx41Q91VN6 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx41Q91VN6 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx41Q91VN6 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx41Q91VN6 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx41Q91VN6 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx41Q91VN6 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx41Q91VN6 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx41Q91VN6 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx41Q91VN6 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx41Q91VN6 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC14.1□□□□□ -0.15
Ddx41Q91VN6 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx41Q91VN6 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx41Q91VN6 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx41Q91VN6 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx41Q91VN6 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx41Q91VN6 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx41Q91VN6 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx41Q91VN6 Gm14130-201ENSMUST00000118417 987 ntBASIC14.1□□□□□ -0.15
Ddx41Q91VN6 Gm13665-201ENSMUST00000120830 528 ntBASIC14.1□□□□□ -0.15
Ddx41Q91VN6 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC14.1□□□□□ -0.15
Ddx41Q91VN6 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC14.1□□□□□ -0.15
Ddx41Q91VN6 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx41Q91VN6 Gm18212-201ENSMUST00000211678 889 ntBASIC14.1□□□□□ -0.15
Ddx41Q91VN6 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx41Q91VN6 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx41Q91VN6 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC14.1□□□□□ -0.15
Ddx41Q91VN6 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC14.1□□□□□ -0.15
Ddx41Q91VN6 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx41Q91VN6 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx41Q91VN6 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.1□□□□□ -0.15
Ddx41Q91VN6 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx41Q91VN6 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx41Q91VN6 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms