Protein–RNA interactions for Protein: Q8C9F4

Gm9949, Predicted gene 9949, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm9949Q8C9F4 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Gm5940-201ENSMUST00000117582 1068 ntBASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Gm13297-201ENSMUST00000120205 934 ntBASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Ighv1-60-201ENSMUST00000195816 405 ntBASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Gm19817-201ENSMUST00000199764 2132 ntBASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Gm7399-201ENSMUST00000032395 858 ntBASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gm9949Q8C9F4 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm9949Q8C9F4 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm9949Q8C9F4 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm9949Q8C9F4 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Gm9949Q8C9F4 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm9949Q8C9F4 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Gm9949Q8C9F4 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Gm9949Q8C9F4 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Gm9949Q8C9F4 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm9949Q8C9F4 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm9949Q8C9F4 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm9949Q8C9F4 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm9949Q8C9F4 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm9949Q8C9F4 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm9949Q8C9F4 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC9.65□□□□□ -0.86
Gm9949Q8C9F4 Gm24830-201ENSMUST00000102024 166 ntBASIC9.65□□□□□ -0.86
Gm9949Q8C9F4 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm9949Q8C9F4 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm9949Q8C9F4 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC9.65□□□□□ -0.86
Gm9949Q8C9F4 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Gm9949Q8C9F4 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Gm9949Q8C9F4 Gm2991-201ENSMUST00000173338 480 ntBASIC9.65□□□□□ -0.86
Gm9949Q8C9F4 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC9.65□□□□□ -0.86
Gm9949Q8C9F4 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Gm9949Q8C9F4 Gm6621-201ENSMUST00000193251 772 ntBASIC9.65□□□□□ -0.86
Gm9949Q8C9F4 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC9.65□□□□□ -0.86
Gm9949Q8C9F4 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC9.65□□□□□ -0.86
Gm9949Q8C9F4 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.86
Gm9949Q8C9F4 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Gm9949Q8C9F4 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm9949Q8C9F4 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm9949Q8C9F4 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Gm9949Q8C9F4 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Gm9949Q8C9F4 Gm26232-201ENSMUST00000083360 166 ntBASIC9.65□□□□□ -0.86
Gm9949Q8C9F4 Rnu1b6-201ENSMUST00000083839 166 ntBASIC9.65□□□□□ -0.86
Gm9949Q8C9F4 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm9949Q8C9F4 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm9949Q8C9F4 AC157950.1-201ENSMUST00000217561 2168 ntBASIC9.65□□□□□ -0.86
Gm9949Q8C9F4 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm9949Q8C9F4 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Gm9949Q8C9F4 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm9949Q8C9F4 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC9.65□□□□□ -0.86
Gm9949Q8C9F4 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Gm9949Q8C9F4 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Gm9949Q8C9F4 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Gm9949Q8C9F4 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms