Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trim65Q8BFW4 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trim65Q8BFW4 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trim65Q8BFW4 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trim65Q8BFW4 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trim65Q8BFW4 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trim65Q8BFW4 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trim65Q8BFW4 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim65Q8BFW4 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.13□□□□□ -0.31
Trim65Q8BFW4 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim65Q8BFW4 Gm26956-201ENSMUST00000182176 986 ntBASIC13.13□□□□□ -0.31
Trim65Q8BFW4 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.13□□□□□ -0.31
Trim65Q8BFW4 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim65Q8BFW4 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim65Q8BFW4 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.13□□□□□ -0.31
Trim65Q8BFW4 Gm42599-201ENSMUST00000201308 469 ntBASIC13.13□□□□□ -0.31
Trim65Q8BFW4 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.13□□□□□ -0.31
Trim65Q8BFW4 Gm6334-201ENSMUST00000207083 228 ntBASIC13.13□□□□□ -0.31
Trim65Q8BFW4 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Trim65Q8BFW4 Gm30285-201ENSMUST00000214614 422 ntBASIC13.13□□□□□ -0.31
Trim65Q8BFW4 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.13□□□□□ -0.31
Trim65Q8BFW4 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.13□□□□□ -0.31
Trim65Q8BFW4 Gm9368-201ENSMUST00000219348 831 ntBASIC13.13□□□□□ -0.31
Trim65Q8BFW4 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.13□□□□□ -0.31
Trim65Q8BFW4 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trim65Q8BFW4 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim65Q8BFW4 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim65Q8BFW4 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim65Q8BFW4 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim65Q8BFW4 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim65Q8BFW4 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim65Q8BFW4 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim65Q8BFW4 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim65Q8BFW4 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim65Q8BFW4 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim65Q8BFW4 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim65Q8BFW4 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trim65Q8BFW4 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trim65Q8BFW4 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim65Q8BFW4 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim65Q8BFW4 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim65Q8BFW4 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim65Q8BFW4 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.13□□□□□ -0.31
Trim65Q8BFW4 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim65Q8BFW4 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.12□□□□□ -0.31
Trim65Q8BFW4 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim65Q8BFW4 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim65Q8BFW4 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC13.12□□□□□ -0.31
Trim65Q8BFW4 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim65Q8BFW4 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim65Q8BFW4 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim65Q8BFW4 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim65Q8BFW4 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim65Q8BFW4 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim65Q8BFW4 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trim65Q8BFW4 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim65Q8BFW4 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trim65Q8BFW4 Gm2991-201ENSMUST00000173338 480 ntBASIC13.12□□□□□ -0.31
Trim65Q8BFW4 Mir8109-201ENSMUST00000184375 117 ntBASIC13.12□□□□□ -0.31
Trim65Q8BFW4 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC13.12□□□□□ -0.31
Trim65Q8BFW4 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.12□□□□□ -0.31
Trim65Q8BFW4 Gm45331-201ENSMUST00000209868 554 ntBASIC13.12□□□□□ -0.31
Trim65Q8BFW4 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.12□□□□□ -0.31
Trim65Q8BFW4 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim65Q8BFW4 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim65Q8BFW4 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trim65Q8BFW4 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim65Q8BFW4 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim65Q8BFW4 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim65Q8BFW4 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trim65Q8BFW4 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim65Q8BFW4 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim65Q8BFW4 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trim65Q8BFW4 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim65Q8BFW4 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim65Q8BFW4 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim65Q8BFW4 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim65Q8BFW4 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.12□□□□□ -0.31
Trim65Q8BFW4 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Trim65Q8BFW4 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim65Q8BFW4 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim65Q8BFW4 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim65Q8BFW4 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim65Q8BFW4 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim65Q8BFW4 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim65Q8BFW4 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim65Q8BFW4 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim65Q8BFW4 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim65Q8BFW4 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim65Q8BFW4 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim65Q8BFW4 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim65Q8BFW4 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim65Q8BFW4 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Trim65Q8BFW4 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.11□□□□□ -0.31
Trim65Q8BFW4 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim65Q8BFW4 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim65Q8BFW4 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.11□□□□□ -0.31
Trim65Q8BFW4 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim65Q8BFW4 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trim65Q8BFW4 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms