Protein–RNA interactions for Protein: Q60803

Traf3, TNF receptor-associated factor 3, mousemouse

Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf3Q60803 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Traf3Q60803 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Traf3Q60803 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Traf3Q60803 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.83□□□□□ -0.36
Traf3Q60803 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.83□□□□□ -0.36
Traf3Q60803 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Traf3Q60803 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Traf3Q60803 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Traf3Q60803 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Traf3Q60803 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Traf3Q60803 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.83□□□□□ -0.36
Traf3Q60803 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Traf3Q60803 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.83□□□□□ -0.36
Traf3Q60803 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.83□□□□□ -0.36
Traf3Q60803 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.83□□□□□ -0.36
Traf3Q60803 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.83□□□□□ -0.36
Traf3Q60803 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Traf3Q60803 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Traf3Q60803 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Traf3Q60803 Gm9230-201ENSMUST00000188228 532 ntBASIC12.83□□□□□ -0.36
Traf3Q60803 Gm45224-201ENSMUST00000208203 414 ntBASIC12.83□□□□□ -0.36
Traf3Q60803 Gm45598-202ENSMUST00000210719 986 ntBASIC12.83□□□□□ -0.36
Traf3Q60803 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Traf3Q60803 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.83□□□□□ -0.36
Traf3Q60803 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Traf3Q60803 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Traf3Q60803 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Traf3Q60803 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Traf3Q60803 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Traf3Q60803 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.83□□□□□ -0.36
Traf3Q60803 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Traf3Q60803 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.82□□□□□ -0.36
Traf3Q60803 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Traf3Q60803 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Traf3Q60803 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Traf3Q60803 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Traf3Q60803 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Traf3Q60803 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Traf3Q60803 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.82□□□□□ -0.36
Traf3Q60803 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Traf3Q60803 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Traf3Q60803 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Traf3Q60803 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Traf3Q60803 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Traf3Q60803 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Traf3Q60803 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Traf3Q60803 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.82□□□□□ -0.36
Traf3Q60803 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.82□□□□□ -0.36
Traf3Q60803 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Traf3Q60803 Gm25700-201ENSMUST00000177693 110 ntBASIC12.82□□□□□ -0.36
Traf3Q60803 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.82□□□□□ -0.36
Traf3Q60803 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.82□□□□□ -0.36
Traf3Q60803 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.82□□□□□ -0.36
Traf3Q60803 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Traf3Q60803 Rprl1-202ENSMUST00000198476 238 ntBASIC12.82□□□□□ -0.36
Traf3Q60803 Gm18711-201ENSMUST00000199341 750 ntBASIC12.82□□□□□ -0.36
Traf3Q60803 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.82□□□□□ -0.36
Traf3Q60803 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Traf3Q60803 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Traf3Q60803 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Traf3Q60803 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Traf3Q60803 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.82□□□□□ -0.36
Traf3Q60803 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Traf3Q60803 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Traf3Q60803 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Traf3Q60803 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.82□□□□□ -0.36
Traf3Q60803 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Traf3Q60803 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Traf3Q60803 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Traf3Q60803 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Traf3Q60803 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Traf3Q60803 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Traf3Q60803 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.81□□□□□ -0.36
Traf3Q60803 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Traf3Q60803 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.81□□□□□ -0.36
Traf3Q60803 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Traf3Q60803 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.81□□□□□ -0.36
Traf3Q60803 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Traf3Q60803 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Traf3Q60803 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Traf3Q60803 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Traf3Q60803 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Traf3Q60803 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Traf3Q60803 Gm23912-201ENSMUST00000104687 87 ntBASIC12.81□□□□□ -0.36
Traf3Q60803 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Traf3Q60803 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.81□□□□□ -0.36
Traf3Q60803 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Traf3Q60803 Gm27390-201ENSMUST00000184516 176 ntBASIC12.81□□□□□ -0.36
Traf3Q60803 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Traf3Q60803 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Traf3Q60803 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.81□□□□□ -0.36
Traf3Q60803 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Traf3Q60803 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Traf3Q60803 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Traf3Q60803 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Traf3Q60803 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Traf3Q60803 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Traf3Q60803 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Traf3Q60803 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
Traf3Q60803 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms