Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nlrc4Q3UP24 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Nlrc4Q3UP24 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.93□□□□□ -0.34
Nlrc4Q3UP24 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nlrc4Q3UP24 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nlrc4Q3UP24 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nlrc4Q3UP24 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nlrc4Q3UP24 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.92□□□□□ -0.34
Nlrc4Q3UP24 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nlrc4Q3UP24 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nlrc4Q3UP24 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Nlrc4Q3UP24 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nlrc4Q3UP24 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nlrc4Q3UP24 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nlrc4Q3UP24 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nlrc4Q3UP24 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nlrc4Q3UP24 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nlrc4Q3UP24 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.92□□□□□ -0.34
Nlrc4Q3UP24 Rprl1-201ENSMUST00000158050 327 ntBASIC12.92□□□□□ -0.34
Nlrc4Q3UP24 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Nlrc4Q3UP24 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.92□□□□□ -0.34
Nlrc4Q3UP24 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.92□□□□□ -0.34
Nlrc4Q3UP24 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.92□□□□□ -0.34
Nlrc4Q3UP24 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nlrc4Q3UP24 Rprl1-202ENSMUST00000198476 238 ntBASIC12.92□□□□□ -0.34
Nlrc4Q3UP24 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.92□□□□□ -0.34
Nlrc4Q3UP24 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.92□□□□□ -0.34
Nlrc4Q3UP24 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.92□□□□□ -0.34
Nlrc4Q3UP24 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.92□□□□□ -0.34
Nlrc4Q3UP24 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.92□□□□□ -0.34
Nlrc4Q3UP24 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.92□□□□□ -0.34
Nlrc4Q3UP24 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.92□□□□□ -0.34
Nlrc4Q3UP24 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.92□□□□□ -0.34
Nlrc4Q3UP24 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nlrc4Q3UP24 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nlrc4Q3UP24 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nlrc4Q3UP24 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nlrc4Q3UP24 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nlrc4Q3UP24 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nlrc4Q3UP24 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nlrc4Q3UP24 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.92□□□□□ -0.34
Nlrc4Q3UP24 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nlrc4Q3UP24 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nlrc4Q3UP24 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nlrc4Q3UP24 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nlrc4Q3UP24 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nlrc4Q3UP24 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nlrc4Q3UP24 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nlrc4Q3UP24 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nlrc4Q3UP24 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Nlrc4Q3UP24 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Nlrc4Q3UP24 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nlrc4Q3UP24 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Nlrc4Q3UP24 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nlrc4Q3UP24 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.91□□□□□ -0.34
Nlrc4Q3UP24 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nlrc4Q3UP24 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Nlrc4Q3UP24 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nlrc4Q3UP24 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nlrc4Q3UP24 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Nlrc4Q3UP24 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nlrc4Q3UP24 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nlrc4Q3UP24 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nlrc4Q3UP24 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nlrc4Q3UP24 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nlrc4Q3UP24 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.91□□□□□ -0.34
Nlrc4Q3UP24 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.91□□□□□ -0.34
Nlrc4Q3UP24 Mir877-201ENSMUST00000104738 85 ntBASIC12.91□□□□□ -0.34
Nlrc4Q3UP24 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nlrc4Q3UP24 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nlrc4Q3UP24 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nlrc4Q3UP24 Gm13665-201ENSMUST00000120830 528 ntBASIC12.91□□□□□ -0.34
Nlrc4Q3UP24 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nlrc4Q3UP24 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.91□□□□□ -0.34
Nlrc4Q3UP24 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.91□□□□□ -0.34
Nlrc4Q3UP24 Gm9230-201ENSMUST00000188228 532 ntBASIC12.91□□□□□ -0.34
Nlrc4Q3UP24 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nlrc4Q3UP24 Gm45598-202ENSMUST00000210719 986 ntBASIC12.91□□□□□ -0.34
Nlrc4Q3UP24 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.91□□□□□ -0.34
Nlrc4Q3UP24 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.91□□□□□ -0.34
Nlrc4Q3UP24 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nlrc4Q3UP24 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Nlrc4Q3UP24 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.91□□□□□ -0.34
Nlrc4Q3UP24 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nlrc4Q3UP24 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nlrc4Q3UP24 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.91□□□□□ -0.34
Nlrc4Q3UP24 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nlrc4Q3UP24 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nlrc4Q3UP24 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Nlrc4Q3UP24 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nlrc4Q3UP24 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nlrc4Q3UP24 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Nlrc4Q3UP24 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.91□□□□□ -0.34
Nlrc4Q3UP24 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.91□□□□□ -0.34
Nlrc4Q3UP24 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nlrc4Q3UP24 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.91□□□□□ -0.34
Nlrc4Q3UP24 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nlrc4Q3UP24 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nlrc4Q3UP24 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nlrc4Q3UP24 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms