Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Khdc4Q3TCX3 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Khdc4Q3TCX3 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Gm4909-201ENSMUST00000118749 794 ntBASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Gm25700-201ENSMUST00000177693 110 ntBASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Gm8712-201ENSMUST00000221090 701 ntBASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Mir339-201ENSMUST00000083659 96 ntBASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc4Q3TCX3 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.69□□□□□ -0.54
Khdc4Q3TCX3 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Khdc4Q3TCX3 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Khdc4Q3TCX3 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Khdc4Q3TCX3 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Khdc4Q3TCX3 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Khdc4Q3TCX3 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Khdc4Q3TCX3 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Khdc4Q3TCX3 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Khdc4Q3TCX3 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Khdc4Q3TCX3 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Khdc4Q3TCX3 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Khdc4Q3TCX3 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Khdc4Q3TCX3 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Khdc4Q3TCX3 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Khdc4Q3TCX3 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Khdc4Q3TCX3 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Khdc4Q3TCX3 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Khdc4Q3TCX3 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Khdc4Q3TCX3 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Khdc4Q3TCX3 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Khdc4Q3TCX3 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Khdc4Q3TCX3 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.69□□□□□ -0.54
Khdc4Q3TCX3 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.69□□□□□ -0.54
Khdc4Q3TCX3 Gm12217-201ENSMUST00000118858 696 ntBASIC11.69□□□□□ -0.54
Khdc4Q3TCX3 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.69□□□□□ -0.54
Khdc4Q3TCX3 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Khdc4Q3TCX3 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.69□□□□□ -0.54
Khdc4Q3TCX3 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.69□□□□□ -0.54
Khdc4Q3TCX3 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.69□□□□□ -0.54
Khdc4Q3TCX3 Mir6927-201ENSMUST00000184494 71 ntBASIC11.69□□□□□ -0.54
Khdc4Q3TCX3 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Khdc4Q3TCX3 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Khdc4Q3TCX3 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.69□□□□□ -0.54
Khdc4Q3TCX3 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Khdc4Q3TCX3 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Khdc4Q3TCX3 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Khdc4Q3TCX3 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Khdc4Q3TCX3 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 152.3 ms