Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx2-3P97334 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx2-3P97334 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx2-3P97334 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx2-3P97334 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx2-3P97334 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC15.33■□□□□ 0.04
Nkx2-3P97334 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC15.33■□□□□ 0.04
Nkx2-3P97334 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx2-3P97334 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx2-3P97334 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx2-3P97334 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx2-3P97334 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Nkx2-3P97334 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx2-3P97334 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx2-3P97334 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx2-3P97334 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx2-3P97334 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx2-3P97334 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx2-3P97334 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx2-3P97334 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Nkx2-3P97334 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx2-3P97334 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx2-3P97334 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Nkx2-3P97334 Gm13916-201ENSMUST00000117368 628 ntBASIC15.32■□□□□ 0.04
Nkx2-3P97334 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx2-3P97334 Gm14314-201ENSMUST00000118225 1015 ntBASIC15.32■□□□□ 0.04
Nkx2-3P97334 Gm13937-201ENSMUST00000121000 988 ntBASIC15.32■□□□□ 0.04
Nkx2-3P97334 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx2-3P97334 Gm24844-201ENSMUST00000158679 127 ntBASIC15.32■□□□□ 0.04
Nkx2-3P97334 Gm38117-201ENSMUST00000194653 939 ntBASIC15.32■□□□□ 0.04
Nkx2-3P97334 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx2-3P97334 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx2-3P97334 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx2-3P97334 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC15.32■□□□□ 0.04
Nkx2-3P97334 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC15.32■□□□□ 0.04
Nkx2-3P97334 Gm2517-201ENSMUST00000215651 348 ntBASIC15.32■□□□□ 0.04
Nkx2-3P97334 AC154290.1-201ENSMUST00000223786 1240 ntBASIC15.32■□□□□ 0.04
Nkx2-3P97334 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC15.32■□□□□ 0.04
Nkx2-3P97334 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx2-3P97334 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Nkx2-3P97334 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx2-3P97334 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx2-3P97334 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx2-3P97334 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx2-3P97334 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx2-3P97334 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx2-3P97334 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx2-3P97334 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx2-3P97334 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx2-3P97334 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx2-3P97334 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC15.31■□□□□ 0.04
Nkx2-3P97334 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx2-3P97334 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Nkx2-3P97334 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx2-3P97334 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx2-3P97334 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx2-3P97334 Gm43364-201ENSMUST00000196046 3274 ntBASIC15.31■□□□□ 0.04
Nkx2-3P97334 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx2-3P97334 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx2-3P97334 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx2-3P97334 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC15.31■□□□□ 0.04
Nkx2-3P97334 Gm11892-201ENSMUST00000117711 1202 ntBASIC15.31■□□□□ 0.04
Nkx2-3P97334 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx2-3P97334 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Nkx2-3P97334 Gm45219-201ENSMUST00000205602 465 ntBASIC15.31■□□□□ 0.04
Nkx2-3P97334 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx2-3P97334 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC15.31■□□□□ 0.04
Nkx2-3P97334 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC15.31■□□□□ 0.04
Nkx2-3P97334 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Nkx2-3P97334 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx2-3P97334 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx2-3P97334 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx2-3P97334 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Nkx2-3P97334 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx2-3P97334 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx2-3P97334 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx2-3P97334 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC15.31■□□□□ 0.04
Nkx2-3P97334 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Nkx2-3P97334 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx2-3P97334 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Nkx2-3P97334 Rnf17-202ENSMUST00000223627 2077 ntBASIC15.31■□□□□ 0.04
Nkx2-3P97334 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Nkx2-3P97334 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx2-3P97334 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-3P97334 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-3P97334 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-3P97334 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-3P97334 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Nkx2-3P97334 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-3P97334 Gm11660-201ENSMUST00000120955 412 ntBASIC15.3■□□□□ 0.04
Nkx2-3P97334 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC15.3■□□□□ 0.04
Nkx2-3P97334 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-3P97334 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC15.3■□□□□ 0.04
Nkx2-3P97334 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-3P97334 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-3P97334 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-3P97334 Mir1956-201ENSMUST00000157748 65 ntBASIC15.3■□□□□ 0.04
Nkx2-3P97334 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Nkx2-3P97334 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Nkx2-3P97334 Gm8815-201ENSMUST00000173809 620 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms