Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Rps28P62858 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Rps28P62858 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Rps28P62858 Clic5-201ENSMUST00000024755 5870 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Rps28P62858 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Rps28P62858 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Rps28P62858 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Rps28P62858 Gm5315-201ENSMUST00000204430 1897 ntBASIC7.02□□□□□ -1.29
Rps28P62858 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Rps28P62858 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
Rps28P62858 Tbx5-201ENSMUST00000018407 3942 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Rps28P62858 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Rps28P62858 Atp8b3-201ENSMUST00000020383 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Rps28P62858 Gm6185-202ENSMUST00000212885 2692 ntTSL 5 BASIC7.02□□□□□ -1.29
Rps28P62858 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Rps28P62858 Cd101-201ENSMUST00000147399 3299 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Rps28P62858 Fbxl12-206ENSMUST00000148631 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Rps28P62858 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Rps28P62858 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC7.01□□□□□ -1.29
Rps28P62858 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Rps28P62858 Gm26749-201ENSMUST00000181387 1933 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Rps28P62858 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Rps28P62858 Apol7b-201ENSMUST00000089469 2210 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Rps28P62858 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Rps28P62858 Radil-202ENSMUST00000085758 3714 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
Rps28P62858 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Rps28P62858 Ldb3-205ENSMUST00000090040 4981 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Rps28P62858 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC7.01□□□□□ -1.29
Rps28P62858 4933439C10Rik-203ENSMUST00000132226 3184 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Rps28P62858 Wdhd1-201ENSMUST00000111790 2962 ntTSL 2 BASIC7.01□□□□□ -1.29
Rps28P62858 Aldoart1-201ENSMUST00000078617 2052 ntBASIC7.01□□□□□ -1.29
Rps28P62858 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Rps28P62858 Pdgfrb-202ENSMUST00000115274 5423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Rps28P62858 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Rps28P62858 Gm45428-201ENSMUST00000209619 1789 ntBASIC7.01□□□□□ -1.29
Rps28P62858 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Rps28P62858 9630028H03Rik-202ENSMUST00000153402 1559 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Rps28P62858 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Rps28P62858 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Rps28P62858 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC7.01□□□□□ -1.29
Rps28P62858 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
Rps28P62858 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
Rps28P62858 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
Rps28P62858 Gm11336-201ENSMUST00000118168 334 ntBASIC7.01□□□□□ -1.29
Rps28P62858 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC7.01□□□□□ -1.29
Rps28P62858 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Rps28P62858 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Rps28P62858 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Rps28P62858 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC7.01□□□□□ -1.29
Rps28P62858 Uba52-ps-201ENSMUST00000183770 379 ntBASIC7.01□□□□□ -1.29
Rps28P62858 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC7.01□□□□□ -1.29
Rps28P62858 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC7.01□□□□□ -1.29
Rps28P62858 1700069P05Rik-201ENSMUST00000204240 785 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Rps28P62858 Gm45747-201ENSMUST00000212203 999 ntBASIC7.01□□□□□ -1.29
Rps28P62858 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Rps28P62858 CT010506.4-201ENSMUST00000225457 351 ntBASIC7.01□□□□□ -1.29
Rps28P62858 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Rps28P62858 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Rps28P62858 Xrcc2-201ENSMUST00000030773 3247 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Rps28P62858 Limk2-204ENSMUST00000110029 2939 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Rps28P62858 Aoc1-203ENSMUST00000162948 2831 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Rps28P62858 Irx6-202ENSMUST00000167261 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Rps28P62858 Gm16486-201ENSMUST00000212436 4584 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Rps28P62858 Erc2-205ENSMUST00000210135 6233 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Rps28P62858 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Rps28P62858 1810041L15Rik-201ENSMUST00000080751 5917 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Rps28P62858 Mid1-205ENSMUST00000112105 3974 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Rps28P62858 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Rps28P62858 Gm44103-201ENSMUST00000204364 3662 ntBASIC7.01□□□□□ -1.29
Rps28P62858 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Rps28P62858 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC7.01□□□□□ -1.29
Rps28P62858 Baz2a-203ENSMUST00000217851 8385 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Rps28P62858 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC7.01□□□□□ -1.29
Rps28P62858 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Rps28P62858 Gm13302-201ENSMUST00000119405 1849 ntBASIC7.01□□□□□ -1.29
Rps28P62858 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Rps28P62858 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC7.01□□□□□ -1.29
Rps28P62858 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Rps28P62858 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Rps28P62858 Gm38271-201ENSMUST00000192296 1603 ntBASIC7.01□□□□□ -1.29
Rps28P62858 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Rps28P62858 Cdc6-202ENSMUST00000093937 2559 ntAPPRIS P4 TSL 1 (best) BASIC7.01□□□□□ -1.29
Rps28P62858 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Rps28P62858 Tsc2-203ENSMUST00000226284 6266 ntAPPRIS ALT2 BASIC7.01□□□□□ -1.29
Rps28P62858 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Rps28P62858 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC7.01□□□□□ -1.29
Rps28P62858 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Rps28P62858 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Rps28P62858 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Rps28P62858 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Rps28P62858 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Rps28P62858 Pnisr-203ENSMUST00000108229 2922 ntTSL 1 (best) BASIC7□□□□□ -1.29
Rps28P62858 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Rps28P62858 Ssrp1-209ENSMUST00000168266 2721 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Rps28P62858 Traip-201ENSMUST00000049348 2706 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Rps28P62858 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
Rps28P62858 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Rps28P62858 Mkl1-203ENSMUST00000131235 4222 ntTSL 5 BASIC7□□□□□ -1.29
Rps28P62858 Cyp2g1-201ENSMUST00000040944 1896 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Rps28P62858 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms