Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
SmoP56726 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
SmoP56726 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.32□□□□□ -0.44
SmoP56726 Gm27627-201ENSMUST00000183644 150 ntBASIC12.32□□□□□ -0.44
SmoP56726 Gm43962-201ENSMUST00000203898 190 ntBASIC12.32□□□□□ -0.44
SmoP56726 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.32□□□□□ -0.44
SmoP56726 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.32□□□□□ -0.44
SmoP56726 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SmoP56726 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
SmoP56726 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SmoP56726 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SmoP56726 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
SmoP56726 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SmoP56726 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.32□□□□□ -0.44
SmoP56726 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.32□□□□□ -0.44
SmoP56726 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
SmoP56726 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SmoP56726 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SmoP56726 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SmoP56726 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SmoP56726 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
SmoP56726 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SmoP56726 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SmoP56726 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
SmoP56726 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SmoP56726 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SmoP56726 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SmoP56726 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.31□□□□□ -0.44
SmoP56726 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
SmoP56726 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SmoP56726 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SmoP56726 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
SmoP56726 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.31□□□□□ -0.44
SmoP56726 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SmoP56726 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
SmoP56726 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SmoP56726 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SmoP56726 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SmoP56726 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SmoP56726 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SmoP56726 Gm12164-201ENSMUST00000121695 551 ntBASIC12.31□□□□□ -0.44
SmoP56726 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.31□□□□□ -0.44
SmoP56726 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.31□□□□□ -0.44
SmoP56726 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
SmoP56726 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.31□□□□□ -0.44
SmoP56726 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SmoP56726 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.31□□□□□ -0.44
SmoP56726 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.31□□□□□ -0.44
SmoP56726 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.31□□□□□ -0.44
SmoP56726 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.31□□□□□ -0.44
SmoP56726 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SmoP56726 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SmoP56726 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
SmoP56726 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SmoP56726 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SmoP56726 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
SmoP56726 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
SmoP56726 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
SmoP56726 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SmoP56726 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.31□□□□□ -0.44
SmoP56726 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SmoP56726 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
SmoP56726 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.31□□□□□ -0.44
SmoP56726 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SmoP56726 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SmoP56726 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SmoP56726 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
SmoP56726 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SmoP56726 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SmoP56726 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
SmoP56726 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
SmoP56726 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SmoP56726 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SmoP56726 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SmoP56726 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.3□□□□□ -0.44
SmoP56726 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
SmoP56726 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SmoP56726 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SmoP56726 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
SmoP56726 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SmoP56726 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.3□□□□□ -0.44
SmoP56726 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SmoP56726 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
SmoP56726 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.3□□□□□ -0.44
SmoP56726 Gm23949-201ENSMUST00000104027 127 ntBASIC12.3□□□□□ -0.44
SmoP56726 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
SmoP56726 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.3□□□□□ -0.44
SmoP56726 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SmoP56726 Gm7857-201ENSMUST00000117957 358 ntBASIC12.3□□□□□ -0.44
SmoP56726 Gm12380-201ENSMUST00000119012 544 ntBASIC12.3□□□□□ -0.44
SmoP56726 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
SmoP56726 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.3□□□□□ -0.44
SmoP56726 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
SmoP56726 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.3□□□□□ -0.44
SmoP56726 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.3□□□□□ -0.44
SmoP56726 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.3□□□□□ -0.44
SmoP56726 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.3□□□□□ -0.44
SmoP56726 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SmoP56726 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SmoP56726 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms