Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc8P09025 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc8P09025 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc8P09025 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc8P09025 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc8P09025 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc8P09025 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc8P09025 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc8P09025 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc8P09025 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc8P09025 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc8P09025 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc8P09025 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc8P09025 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Hoxc8P09025 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc8P09025 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc8P09025 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC12.98□□□□□ -0.33
Hoxc8P09025 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc8P09025 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.98□□□□□ -0.33
Hoxc8P09025 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc8P09025 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc8P09025 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Hoxc8P09025 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.98□□□□□ -0.33
Hoxc8P09025 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC12.98□□□□□ -0.33
Hoxc8P09025 Gm12407-201ENSMUST00000180219 324 ntBASIC12.98□□□□□ -0.33
Hoxc8P09025 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.98□□□□□ -0.33
Hoxc8P09025 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc8P09025 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC12.98□□□□□ -0.33
Hoxc8P09025 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Hoxc8P09025 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc8P09025 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC12.98□□□□□ -0.33
Hoxc8P09025 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc8P09025 AC132901.1-201ENSMUST00000224345 508 ntBASIC12.98□□□□□ -0.33
Hoxc8P09025 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc8P09025 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc8P09025 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.98□□□□□ -0.33
Hoxc8P09025 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.98□□□□□ -0.33
Hoxc8P09025 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc8P09025 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.98□□□□□ -0.33
Hoxc8P09025 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc8P09025 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc8P09025 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Hoxc8P09025 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc8P09025 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.98□□□□□ -0.33
Hoxc8P09025 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Hoxc8P09025 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc8P09025 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc8P09025 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc8P09025 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc8P09025 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc8P09025 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc8P09025 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.97□□□□□ -0.33
Hoxc8P09025 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc8P09025 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Hoxc8P09025 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc8P09025 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc8P09025 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc8P09025 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc8P09025 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc8P09025 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc8P09025 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc8P09025 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc8P09025 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.97□□□□□ -0.33
Hoxc8P09025 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc8P09025 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc8P09025 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc8P09025 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc8P09025 Gm3150-201ENSMUST00000166418 204 ntBASIC12.97□□□□□ -0.33
Hoxc8P09025 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.97□□□□□ -0.33
Hoxc8P09025 Gm23153-201ENSMUST00000175323 313 ntBASIC12.97□□□□□ -0.33
Hoxc8P09025 Gm9192-201ENSMUST00000183221 985 ntBASIC12.97□□□□□ -0.33
Hoxc8P09025 Gm38210-201ENSMUST00000191944 809 ntBASIC12.97□□□□□ -0.33
Hoxc8P09025 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC12.97□□□□□ -0.33
Hoxc8P09025 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Hoxc8P09025 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Hoxc8P09025 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.97□□□□□ -0.33
Hoxc8P09025 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc8P09025 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc8P09025 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc8P09025 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc8P09025 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.97□□□□□ -0.33
Hoxc8P09025 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc8P09025 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc8P09025 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc8P09025 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.97□□□□□ -0.33
Hoxc8P09025 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc8P09025 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc8P09025 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Hoxc8P09025 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.97□□□□□ -0.33
Hoxc8P09025 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc8P09025 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.96□□□□□ -0.33
Hoxc8P09025 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc8P09025 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc8P09025 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc8P09025 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Hoxc8P09025 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc8P09025 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.96□□□□□ -0.33
Hoxc8P09025 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Hoxc8P09025 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc8P09025 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms