Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cpsf4lE9Q2N0 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cpsf4lE9Q2N0 Matn2-203ENSMUST00000226766 3252 ntBASIC10.37□□□□□ -0.75
Cpsf4lE9Q2N0 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cpsf4lE9Q2N0 Gm14644-201ENSMUST00000116671 647 ntBASIC10.37□□□□□ -0.75
Cpsf4lE9Q2N0 Gm12015-201ENSMUST00000117065 843 ntBASIC10.37□□□□□ -0.75
Cpsf4lE9Q2N0 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cpsf4lE9Q2N0 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC10.37□□□□□ -0.75
Cpsf4lE9Q2N0 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC10.37□□□□□ -0.75
Cpsf4lE9Q2N0 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cpsf4lE9Q2N0 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cpsf4lE9Q2N0 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC10.37□□□□□ -0.75
Cpsf4lE9Q2N0 Gm20482-202ENSMUST00000174729 825 ntBASIC10.37□□□□□ -0.75
Cpsf4lE9Q2N0 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC10.37□□□□□ -0.75
Cpsf4lE9Q2N0 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.37□□□□□ -0.75
Cpsf4lE9Q2N0 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC10.37□□□□□ -0.75
Cpsf4lE9Q2N0 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cpsf4lE9Q2N0 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC10.37□□□□□ -0.75
Cpsf4lE9Q2N0 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cpsf4lE9Q2N0 Gm6015-201ENSMUST00000217493 1586 ntBASIC10.37□□□□□ -0.75
Cpsf4lE9Q2N0 Gm18615-201ENSMUST00000222919 1031 ntBASIC10.37□□□□□ -0.75
Cpsf4lE9Q2N0 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cpsf4lE9Q2N0 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cpsf4lE9Q2N0 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cpsf4lE9Q2N0 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cpsf4lE9Q2N0 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Cpsf4lE9Q2N0 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC10.37□□□□□ -0.75
Cpsf4lE9Q2N0 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Cpsf4lE9Q2N0 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cpsf4lE9Q2N0 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.37□□□□□ -0.75
Cpsf4lE9Q2N0 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cpsf4lE9Q2N0 AC126444.1-201ENSMUST00000225938 1768 ntBASIC10.37□□□□□ -0.75
Cpsf4lE9Q2N0 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Gm5070-201ENSMUST00000177599 862 ntBASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Gm18711-201ENSMUST00000199341 750 ntBASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Gm7172-201ENSMUST00000218047 1152 ntBASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Gm18782-201ENSMUST00000209023 1399 ntBASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cpsf4lE9Q2N0 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cpsf4lE9Q2N0 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cpsf4lE9Q2N0 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cpsf4lE9Q2N0 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Cpsf4lE9Q2N0 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Cpsf4lE9Q2N0 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC10.35□□□□□ -0.75
Cpsf4lE9Q2N0 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC10.35□□□□□ -0.75
Cpsf4lE9Q2N0 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.35□□□□□ -0.75
Cpsf4lE9Q2N0 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC10.35□□□□□ -0.75
Cpsf4lE9Q2N0 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cpsf4lE9Q2N0 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cpsf4lE9Q2N0 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cpsf4lE9Q2N0 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Cpsf4lE9Q2N0 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms