Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 Gm12390-201ENSMUST00000117897 397 ntBASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 Gm9083-201ENSMUST00000120423 819 ntBASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 Gm18304-201ENSMUST00000189162 546 ntBASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 Gm5781-201ENSMUST00000219792 443 ntBASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc194A0A140LIT1 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc194A0A140LIT1 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc194A0A140LIT1 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc194A0A140LIT1 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc194A0A140LIT1 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.19□□□□□ -0.46
Ccdc194A0A140LIT1 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc194A0A140LIT1 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc194A0A140LIT1 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc194A0A140LIT1 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc194A0A140LIT1 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc194A0A140LIT1 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc194A0A140LIT1 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc194A0A140LIT1 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc194A0A140LIT1 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc194A0A140LIT1 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc194A0A140LIT1 Gm12314-201ENSMUST00000118104 538 ntBASIC12.19□□□□□ -0.46
Ccdc194A0A140LIT1 Gm11591-201ENSMUST00000120063 702 ntBASIC12.19□□□□□ -0.46
Ccdc194A0A140LIT1 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.19□□□□□ -0.46
Ccdc194A0A140LIT1 Gm16379-201ENSMUST00000161469 348 ntBASIC12.19□□□□□ -0.46
Ccdc194A0A140LIT1 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc194A0A140LIT1 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.19□□□□□ -0.46
Ccdc194A0A140LIT1 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc194A0A140LIT1 Gm8762-201ENSMUST00000193486 339 ntBASIC12.19□□□□□ -0.46
Ccdc194A0A140LIT1 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.19□□□□□ -0.46
Ccdc194A0A140LIT1 Gm44958-201ENSMUST00000203734 736 ntBASIC12.19□□□□□ -0.46
Ccdc194A0A140LIT1 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc194A0A140LIT1 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Ccdc194A0A140LIT1 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.19□□□□□ -0.46
Ccdc194A0A140LIT1 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc194A0A140LIT1 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc194A0A140LIT1 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.19□□□□□ -0.46
Ccdc194A0A140LIT1 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc194A0A140LIT1 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc194A0A140LIT1 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc194A0A140LIT1 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc194A0A140LIT1 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc194A0A140LIT1 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc194A0A140LIT1 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Ccdc194A0A140LIT1 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc194A0A140LIT1 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc194A0A140LIT1 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc194A0A140LIT1 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.19□□□□□ -0.46
Ccdc194A0A140LIT1 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc194A0A140LIT1 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc194A0A140LIT1 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc194A0A140LIT1 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc194A0A140LIT1 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc194A0A140LIT1 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc194A0A140LIT1 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc194A0A140LIT1 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc194A0A140LIT1 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc194A0A140LIT1 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc194A0A140LIT1 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc194A0A140LIT1 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.18□□□□□ -0.46
Ccdc194A0A140LIT1 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc194A0A140LIT1 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc194A0A140LIT1 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc194A0A140LIT1 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.18□□□□□ -0.46
Ccdc194A0A140LIT1 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc194A0A140LIT1 Gm7809-201ENSMUST00000153199 742 ntBASIC12.18□□□□□ -0.46
Ccdc194A0A140LIT1 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.18□□□□□ -0.46
Ccdc194A0A140LIT1 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc194A0A140LIT1 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.18□□□□□ -0.46
Ccdc194A0A140LIT1 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms