Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC8.91□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC8.91□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC8.91□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gm5884-201ENSMUST00000036712 1479 ntBASIC8.91□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Trav9n-2A0A0G2JDP3 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC8.91□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC8.91□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gm14127-201ENSMUST00000117906 678 ntBASIC8.91□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gm9083-201ENSMUST00000120423 819 ntBASIC8.91□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gm12329-201ENSMUST00000120829 1007 ntBASIC8.91□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Trav4d-2-201ENSMUST00000120914 335 ntBASIC8.91□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gm24548-201ENSMUST00000158650 108 ntBASIC8.91□□□□□ -0.98
Trav9n-2A0A0G2JDP3 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gm27023-201ENSMUST00000182372 285 ntBASIC8.91□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC8.91□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC8.91□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC8.91□□□□□ -0.98
Trav9n-2A0A0G2JDP3 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gm10076-201ENSMUST00000073238 384 ntBASIC8.91□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gm24136-201ENSMUST00000083374 165 ntBASIC8.91□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav9n-2A0A0G2JDP3 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC8.91□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gm44241-201ENSMUST00000203230 1662 ntBASIC8.91□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC8.91□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC8.9□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC8.9□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC8.9□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gm23931-201ENSMUST00000103842 109 ntBASIC8.9□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gm4986-201ENSMUST00000119731 549 ntBASIC8.9□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gm27572-201ENSMUST00000183702 255 ntBASIC8.9□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC8.9□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gm37201-201ENSMUST00000191845 523 ntBASIC8.9□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC8.9□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gm43133-201ENSMUST00000197472 463 ntBASIC8.9□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC8.9□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gm39404-201ENSMUST00000216350 313 ntBASIC8.9□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC8.9□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC8.9□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.99
Trav9n-2A0A0G2JDP3 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms