Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nip7Q9CXK8 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nip7Q9CXK8 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nip7Q9CXK8 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Nip7Q9CXK8 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nip7Q9CXK8 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nip7Q9CXK8 AC091458.1-201ENSMUST00000220902 1361 ntBASIC15.24■□□□□ 0.03
Nip7Q9CXK8 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nip7Q9CXK8 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nip7Q9CXK8 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Nip7Q9CXK8 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nip7Q9CXK8 Gm4735-201ENSMUST00000138679 1302 ntBASIC15.23■□□□□ 0.03
Nip7Q9CXK8 Gm10152-201ENSMUST00000193475 1344 ntBASIC15.23■□□□□ 0.03
Nip7Q9CXK8 Gm5855-201ENSMUST00000200240 1305 ntBASIC15.23■□□□□ 0.03
Nip7Q9CXK8 AC154262.2-202ENSMUST00000225158 1331 ntBASIC15.23■□□□□ 0.03
Nip7Q9CXK8 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nip7Q9CXK8 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Nip7Q9CXK8 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nip7Q9CXK8 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nip7Q9CXK8 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Nip7Q9CXK8 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nip7Q9CXK8 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Nip7Q9CXK8 Gm14247-201ENSMUST00000120950 237 ntBASIC15.23■□□□□ 0.03
Nip7Q9CXK8 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC15.23■□□□□ 0.03
Nip7Q9CXK8 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
Nip7Q9CXK8 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC15.23■□□□□ 0.03
Nip7Q9CXK8 Gm43058-201ENSMUST00000197645 625 ntBASIC15.23■□□□□ 0.03
Nip7Q9CXK8 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC15.23■□□□□ 0.03
Nip7Q9CXK8 CT485607.1-201ENSMUST00000216100 85 ntBASIC15.23■□□□□ 0.03
Nip7Q9CXK8 AC154290.1-201ENSMUST00000223786 1240 ntBASIC15.23■□□□□ 0.03
Nip7Q9CXK8 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Nip7Q9CXK8 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nip7Q9CXK8 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nip7Q9CXK8 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nip7Q9CXK8 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Nip7Q9CXK8 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nip7Q9CXK8 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Nip7Q9CXK8 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC15.23■□□□□ 0.03
Nip7Q9CXK8 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nip7Q9CXK8 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nip7Q9CXK8 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nip7Q9CXK8 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nip7Q9CXK8 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nip7Q9CXK8 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Nip7Q9CXK8 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nip7Q9CXK8 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Nip7Q9CXK8 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Nip7Q9CXK8 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Nip7Q9CXK8 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nip7Q9CXK8 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nip7Q9CXK8 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nip7Q9CXK8 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC15.22■□□□□ 0.03
Nip7Q9CXK8 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nip7Q9CXK8 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nip7Q9CXK8 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nip7Q9CXK8 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nip7Q9CXK8 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Nip7Q9CXK8 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nip7Q9CXK8 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nip7Q9CXK8 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Nip7Q9CXK8 Gm44260-201ENSMUST00000204946 2094 ntBASIC15.22■□□□□ 0.03
Nip7Q9CXK8 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Nip7Q9CXK8 Gm14585-201ENSMUST00000120713 634 ntBASIC15.22■□□□□ 0.03
Nip7Q9CXK8 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nip7Q9CXK8 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC15.22■□□□□ 0.03
Nip7Q9CXK8 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC15.22■□□□□ 0.03
Nip7Q9CXK8 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nip7Q9CXK8 AC153505.1-201ENSMUST00000218819 1071 ntBASIC15.22■□□□□ 0.03
Nip7Q9CXK8 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC15.22■□□□□ 0.03
Nip7Q9CXK8 Snora73b-201ENSMUST00000083419 205 ntBASIC15.22■□□□□ 0.03
Nip7Q9CXK8 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nip7Q9CXK8 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Nip7Q9CXK8 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nip7Q9CXK8 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nip7Q9CXK8 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nip7Q9CXK8 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nip7Q9CXK8 Gm45706-201ENSMUST00000213063 2136 ntBASIC15.22■□□□□ 0.03
Nip7Q9CXK8 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nip7Q9CXK8 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Nip7Q9CXK8 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nip7Q9CXK8 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nip7Q9CXK8 Gm38346-201ENSMUST00000192379 2639 ntBASIC15.21■□□□□ 0.03
Nip7Q9CXK8 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nip7Q9CXK8 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Nip7Q9CXK8 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nip7Q9CXK8 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nip7Q9CXK8 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nip7Q9CXK8 Gm5419-201ENSMUST00000119301 527 ntBASIC15.21■□□□□ 0.03
Nip7Q9CXK8 Gm13263-201ENSMUST00000121271 838 ntBASIC15.21■□□□□ 0.03
Nip7Q9CXK8 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC15.21■□□□□ 0.03
Nip7Q9CXK8 Gm7666-201ENSMUST00000146631 819 ntBASIC15.21■□□□□ 0.03
Nip7Q9CXK8 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nip7Q9CXK8 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC15.21■□□□□ 0.03
Nip7Q9CXK8 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC15.21■□□□□ 0.03
Nip7Q9CXK8 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC15.21■□□□□ 0.03
Nip7Q9CXK8 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nip7Q9CXK8 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC15.21■□□□□ 0.03
Nip7Q9CXK8 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC15.21■□□□□ 0.03
Nip7Q9CXK8 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nip7Q9CXK8 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms